DRSC/TRiP Functional Genomics Resources

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Protein Alignment sowi and rcvrn

DIOPT Version :10

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_002937040.1 Gene:rcvrn / 100302393 XenbaseID:XB-GENE-973335 Length:202 Species:Xenopus tropicalis


Alignment Length:217 Identity:49/217 - (22%)
Similarity:88/217 - (40%) Gaps:67/217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MENSRFAALYGSLIKELTLTSELSQTDITCLLVVYYKFSKANGPQCK--QMTKKQFYQIFLVLFN 73
            |.||:.:||...:::||.|.::.||.:   |...|..|.|    :|.  :::|:||..|:...|.
 Frog     1 MGNSKSSALSKEILEELQLNTKFSQEE---LCTWYQSFLK----ECPTGRISKQQFEGIYSKFFP 58

  Fly    74 VASVQVIERTLLAITKDTKYVSPRAWI-HLFDLYTTND--------------------IQVRMRF 117
            .|                   .|:|:. |:|..:.:|:                    ...::.:
 Frog    59 DA-------------------DPKAYARHVFRSFDSNNDGTLDFKEYMIALHMTSSGKANQKLEW 104

  Fly   118 AFEVYDTKGTGVIDREQV---GTACEKFFYGEDEDELNE-------LKADMTEFLMKKFDLDK-- 170
            ||.:||..|.|.|::.:|   .||..|....||:..|.|       ....:.:|..|| |.||  
 Frog   105 AFSLYDVDGNGTINKSEVLEIITAIFKMINTEDQKHLPEDENTPERRTNKIWDFFGKK-DNDKLT 168

  Fly   171 -----DGVISYEDYSTVVEQQP 187
                 .|:::.::...:::.:|
 Frog   169 EGEFIQGIMNNKEILRLIQFEP 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 114..179 CDD:463900 22/81 (27%)
rcvrnXP_002937040.1 FRQ1 42..177 CDD:444056 33/154 (21%)
EFh 65..127 CDD:238008 11/61 (18%)

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