DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31482 and R3hdml

DIOPT Version :10

Sequence 1:NP_731097.1 Gene:CG31482 / 40806 FlyBaseID:FBgn0051482 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001102432.1 Gene:R3hdml / 366245 RGDID:1305296 Length:253 Species:Rattus norvegicus


Alignment Length:123 Identity:31/123 - (25%)
Similarity:55/123 - (44%) Gaps:31/123 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LNEHNRLREK-HGSPP------LTLDDELTKGCEEYAK--VLANNEKLEHSSSAGQNY-GENLCM 81
            |:.||.:|.. |  ||      :..|::|.:..|.:|.  :.|      |..|....| |:||.:
  Rat    67 LDYHNHIRASVH--PPASNMEYMVWDEQLARAAEAWATQCIWA------HGPSQLTKYVGQNLSV 123

  Fly    82 RS---QTPLQCVQDWYDEIADYDFEKPQFA------MSTG----HFTALVWKNAKKMG 126
            .|   ::.:..|:.|.:|...|.|..|:..      :.:|    |:|.:||.::.::|
  Rat   124 HSGRYRSVVDLVKSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLG 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31482NP_731097.1 CAP_GAPR1-like 21..149 CDD:349401 31/123 (25%)
R3hdmlNP_001102432.1 CAP_R3HDML 63..208 CDD:349409 31/123 (25%)

Return to query results.
Submit another query.