DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31482 and R3hdml

DIOPT Version :9

Sequence 1:NP_731097.1 Gene:CG31482 / 40806 FlyBaseID:FBgn0051482 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001102432.1 Gene:R3hdml / 366245 RGDID:1305296 Length:253 Species:Rattus norvegicus


Alignment Length:123 Identity:31/123 - (25%)
Similarity:55/123 - (44%) Gaps:31/123 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LNEHNRLREK-HGSPP------LTLDDELTKGCEEYAK--VLANNEKLEHSSSAGQNY-GENLCM 81
            |:.||.:|.. |  ||      :..|::|.:..|.:|.  :.|      |..|....| |:||.:
  Rat    67 LDYHNHIRASVH--PPASNMEYMVWDEQLARAAEAWATQCIWA------HGPSQLTKYVGQNLSV 123

  Fly    82 RS---QTPLQCVQDWYDEIADYDFEKPQFA------MSTG----HFTALVWKNAKKMG 126
            .|   ::.:..|:.|.:|...|.|..|:..      :.:|    |:|.:||.::.::|
  Rat   124 HSGRYRSVVDLVKSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLG 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31482NP_731097.1 SCP_GAPR-1_like 21..149 CDD:240182 31/123 (25%)
R3hdmlNP_001102432.1 SCP 65..207 CDD:294090 31/123 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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