DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31482 and vap-1

DIOPT Version :10

Sequence 1:NP_731097.1 Gene:CG31482 / 40806 FlyBaseID:FBgn0051482 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001024553.1 Gene:vap-1 / 181768 WormBaseID:WBGene00006886 Length:424 Species:Caenorhabditis elegans


Alignment Length:173 Identity:40/173 - (23%)
Similarity:69/173 - (39%) Gaps:30/173 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QEDHLNEHNRLR-------EKHG------SPPLTLDDELTKGC--EEYAKVLANNEKLEHSSSAG 72
            :::.|:.||:||       |..|      :|......:|...|  |..|:..|.....:||:||.
 Worm   236 RQNFLDTHNKLRTSLAKGLEADGIAAGAFAPMAKQMPKLKYSCTVEANARTWAKGCLYQHSTSAQ 300

  Fly    73 Q-NYGENLCM---RSQTPLQCVQD----WYDEIADYD------FEKPQFAMSTGHFTALVWKNAK 123
            : ..||||.|   .:...:|..:|    |:.|:.|:.      ..:..|....||:|.:.|:...
 Worm   301 RPGLGENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRGVGHYTQMAWEGTT 365

  Fly   124 KMGIGQAKDKKGYYWVVARYYPPVNVNGQFEENVLPPIKGEGD 166
            ::|. ..::...:.:.|.:|.|..|...|.......|...:.|
 Worm   366 EIGC-FVENCPTFTYSVCQYGPAGNYMNQLIYTKGSPCTADAD 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31482NP_731097.1 CAP_GAPR1-like 21..149 CDD:349401 36/154 (23%)
vap-1NP_001024553.1 SCP 31..175 CDD:214553
SCP 234..386 CDD:214553 35/150 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.