DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31482 and crisp1.6

DIOPT Version :9

Sequence 1:NP_731097.1 Gene:CG31482 / 40806 FlyBaseID:FBgn0051482 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_002933627.1 Gene:crisp1.6 / 100379939 XenbaseID:XB-GENE-5838744 Length:237 Species:Xenopus tropicalis


Alignment Length:174 Identity:36/174 - (20%)
Similarity:63/174 - (36%) Gaps:37/174 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ILIVLALCLLVLVI----------------ADLQEDHLNEHNRLREK-HGSPPLTLDDELTKGCE 53
            :|::..||.:..:|                :.:|:..::.||..|.. :.|....|....::...
 Frog     1 MLLIAVLCAMPFIIHAQSTGTLPSSLWTTTSTVQQVIVDTHNGYRRSVNPSARNMLKMMWSEAAA 65

  Fly    54 EYAKVLANNEKLEHSSS-----AGQNYGENLCMRSQTPLQCVQDWYDEIADYDFEKPQFAMS--- 110
            ..|...:......||.:     :|...|||:.:.|..     ..|.:.|..::.|...|...   
 Frog    66 SNAATWSATCPAAHSPTSQRTISGVTCGENIFIASYP-----ASWQEAITAWNSESQYFQYGVGP 125

  Fly   111 ------TGHFTALVWKNAKKMGIGQAKDKKGYYWVVARYYPPVN 148
                  |||:|.|||.|:..:|...:.....|.: |.:|.|..|
 Frog   126 TSSNQVTGHYTQLVWYNSYMVGCAVSNCNNQYIY-VCQYCPMGN 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31482NP_731097.1 SCP_GAPR-1_like 21..149 CDD:240182 32/143 (22%)
crisp1.6XP_002933627.1 CAP_CRISP 32..166 CDD:349402 30/139 (22%)
Crisp 183..236 CDD:369954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.