DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and Negr1

DIOPT Version :10

Sequence 1:NP_788586.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_063138498.1 Gene:Negr1 / 59318 RGDID:708416 Length:423 Species:Rattus norvegicus


Alignment Length:358 Identity:84/358 - (23%)
Similarity:130/358 - (36%) Gaps:109/358 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LAQVSSLLPEASALSATSGLVEPYLDGYATSNVTTQIGTHAYLPCRVKQLGNKSVSWIR-----L 154
            ||.|  ||...|.|.|...:..|:.   |..|:..:.|..|.|.|.::...:|. :|:.     .
  Rat    15 LAAV--LLSLCSCLPAGQSVDFPWA---AVDNMLVRKGDTAVLRCYLEDGASKG-AWLNRSSIIF 73

  Fly   155 RDGHILTVDRAVFIADQRFLAIKQPDKYWTLQIKYVQARDAGSYECQVSTE--PKVSARVQLQVV 217
            ..|...:||..|.|:     .:.:.|  ::|||:.|...|.|.|.|.|.|:  |: :.:|.|.|.
  Rat    74 AGGDKWSVDPRVSIS-----TLNKRD--YSLQIQNVDVTDDGPYTCSVQTQHTPR-TMQVHLTVQ 130

  Fly   218 VPRTEILGEPDRYVKAGSNVVLRCIVRGALEPPTFIMWYH------------------------G 258
            ||........|..:..|:||.|.|:..|..||.  |.|.|                        |
  Rat   131 VPPKIYDISNDMTINEGTNVTLTCLATGKPEPA--ISWRHISPSAKPFENGQYLDIYGITRDQAG 193

  Fly   259 AEQLAA-------DSRRHRTQLD--PNL---------PEASG----------------------- 282
            ..:.:|       |.::.|..::  |.:         |..||                       
  Rat   194 EYECSAENDVSFPDVKKVRVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKRL 258

  Fly   283 -EGQ--------STIGSLIIESAKKRDTGNYTCSPSN---SPSATVTLNIINGESSASAVTSSAA 335
             .||        ||...|.:.:..:...|||||..:|   :.:|::.||.|...:::|.|||...
  Rat   259 FNGQQGIIIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNQIIEPTTSSPVTSPGQ 323

  Fly   336 TTRAYALSILALLLSVIL---------IGVGHR 359
            ....:...:..|.||..:         :.:|||
  Rat   324 YPHTFTKYVWVLFLSSKISALSQKHSQLLLGHR 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_788586.1 Ig 125..216 CDD:472250 26/97 (27%)
Ig strand B 135..139 CDD:409353 2/3 (67%)
Ig strand C 148..152 CDD:409353 0/3 (0%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 2/4 (50%)
IG_like 227..320 CDD:214653 33/169 (20%)
Ig strand B 237..241 CDD:409544 2/3 (67%)
Ig strand C 252..256 CDD:409544 1/3 (33%)
Ig strand E 289..293 CDD:409544 1/3 (33%)
Ig strand G 313..316 CDD:409544 1/2 (50%)
Negr1XP_063138498.1 None

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