DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and dscama

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_021334866.1 Gene:dscama / 568643 ZFINID:ZDB-GENE-050310-7 Length:2025 Species:Danio rerio


Alignment Length:251 Identity:65/251 - (25%)
Similarity:104/251 - (41%) Gaps:56/251 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 VEPYLDGYATSNVTTQ--------------IGTHAYLPCRVKQLGNKSVSWIRLRDGHILTVDRA 165
            |:|.|....:.:||.:              ||...::||.|:. |:..:|....:||..:.....
Zfish   580 VQPQLFKNQSVHVTVKVPPFIQPFEFPRYSIGHRVFVPCVVRS-GDLPISITWEKDGKSINASLG 643

  Fly   166 VFIADQRFLAIKQPDKYWTLQIKYVQARDAGSYECQVSTEPKVSARVQLQVVV---PRTEILGEP 227
            |.|.:..|.:        :|:|..:|....|:|.|....:..| .:.|.|::|   ||.::  :|
Zfish   644 VTIDNIDFTS--------SLRISNLQRVHNGTYTCIAQNDAAV-VKYQSQLIVRVPPRFKV--QP 697

  Fly   228 -DRYVKAGSNVVLRCIVRGALEPPTFIMWYH--GA-----EQLAADSRRHRTQLDPNLPEASGEG 284
             |:....|.:|:|.|...|  ||...|.|.:  ||     :.:|.:| ..|.||..|        
Zfish   698 QDQDGIYGKSVILNCSADG--EPRPTIEWKYSKGAGVPQFQPIALNS-GFRVQLLGN-------- 751

  Fly   285 QSTIGSLIIESAKKRDTGNYTCSPSNSPSATVTLNIINGESSASAVTS----SAAT 336
                |||:|:...:.|.|.|.|..||...|.|:.::.......:.:||    |.||
Zfish   752 ----GSLLIKHVLEEDAGYYLCKVSNDVGADVSKSMYLNVKIPAMITSYPNNSLAT 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 22/104 (21%)
Ig 127..217 CDD:299845 23/103 (22%)
IG_like 227..320 CDD:214653 31/100 (31%)
IGc2 234..311 CDD:197706 26/83 (31%)
dscamaXP_021334866.1 Ig 124..217 CDD:325142
I-set 236..311 CDD:254352
IG_like 321..402 CDD:214653
I-set 408..502 CDD:333254
IGc2 524..579 CDD:197706
Ig 614..679 CDD:319273 17/74 (23%)
Ig_DSCAM 708..787 CDD:143211 28/93 (30%)
Ig 805..898 CDD:325142
FN3 894..988 CDD:238020
FN3 995..1092 CDD:238020
fn3 1100..1186 CDD:306538
fn3 1199..1282 CDD:306538
Ig 1312..1377 CDD:319273
fn3 1405..1471 CDD:306538
FN3 1492..1563 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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