DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and lrit3a

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:159 Identity:36/159 - (22%)
Similarity:59/159 - (37%) Gaps:56/159 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 ECQVSTEPKVSARVQLQVVVPRTEIL---------------GEPDRYVK-------------AGS 235
            :|::|...::|....:.||: ..::|               .|.|:.||             .||
Zfish   204 DCRISKLIELSKMAGIPVVL-MDQVLTCSGPEHLSGVLFQRAELDQC
VKPTVMTSATKITSPLGS 267

  Fly   236 NVVLRCIVRGALEPPTFIMWYHGAEQLAADSRRHRTQLDPN------LPEASGEGQSTIGSLIIE 294
            ||:|||...|.  |...::|               |..|.:      :.|:.|||... ..|.:.
Zfish   268 NVLLRCDANGF--PTPTLLW---------------TTADGSVVNNTVVQESPGEGVRW-SILSLH 314

  Fly   295 SAKKRDTGNYTCSPSN---SPSATVTLNI 320
            |...:|.|:|.|...|   :..|.:||::
Zfish   315 SIVFKDAGDYRCKAKNVAGNAEAYITLSV 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 3/16 (19%)
Ig 127..217 CDD:299845 3/17 (18%)
IG_like 227..320 CDD:214653 29/114 (25%)
IGc2 234..311 CDD:197706 23/85 (27%)
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566
leucine-rich repeat 83..106 CDD:275378
LRR_4 107..145 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_8 129..>171 CDD:290566
LRR_4 129..170 CDD:289563
leucine-rich repeat 131..154 CDD:275378
leucine-rich repeat 155..168 CDD:275378
TPKR_C2 199..249 CDD:301599 8/45 (18%)
Ig 252..343 CDD:299845 26/108 (24%)
IG_like 261..343 CDD:214653 26/99 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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