DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr11 and sdk1a

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_009297968.1 Gene:sdk1a / 558391 ZFINID:ZDB-GENE-081104-374 Length:2245 Species:Danio rerio


Alignment Length:294 Identity:80/294 - (27%)
Similarity:112/294 - (38%) Gaps:56/294 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 AISSDESGDPSSATAFSSLAQVSSLLPEASAL-------SATSGLVEPYLDGYATS--------- 125
            |:...:..:|......|...||..|.|..:.:       ||....|..|||  .||         
Zfish   454 AVPLSKLNNPRYKIISSMGLQVRKLQPSDAGIFQCFARNSAGEAQVHTYLD--VTSMAPAFTAPP 516

  Fly   126 -NVTTQIGTHAYLPCRVKQLGNKSVSWIRLRDGHILTVDRAVFIADQRFLAIKQPDKYWTLQIKY 189
             ::|...|..|...|||......::.|  .||..||.   :..:...||..::...    |||:.
Zfish   517 LDITVTDGAVAAFTCRVSGAPKPAIVW--RRDTQILA---SGSVQIPRFTLLESGG----LQIQP 572

  Fly   190 VQARDAGSYEC-QVSTEPKVSARVQLQVVVPRTEILGEP-DRYVKAGSNVVLRCIVRGALEPPTF 252
            |..:|.|:|.| ..::|..::|...| .|..||.|...| ||.|..|:..:|.|   ||...|..
Zfish   573 VVLQDTGNYTCYAANSEGAINASASL-TVWSRTSISSPPTDRRVIKGTTAILEC---GATHDPRV 633

  Fly   253 ---IMWYHGAEQLAADSRRHRTQLDPNLPEASGEGQSTIGSLIIESAKKRDTGNYTC---SPSNS 311
               .:|... |:|.:.||..|..|..             |||.|......|.|||||   |.:.:
Zfish   634 GVRYVWKKD-EELVSHSRGGRISLQE-------------GSLHISQTWSGDIGNYTCDVISEAGN 684

  Fly   312 PSATVTLNIINGESSASAVTSS--AATTRAYALS 343
            .|....|.:|....|...:.:|  |..:|:..||
Zfish   685 ESKEARLEVIELPHSPRNLQASLNANDSRSVDLS 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 25/101 (25%)
Ig 127..217 CDD:299845 24/90 (27%)
IG_like 227..320 CDD:214653 30/99 (30%)
IGc2 234..311 CDD:197706 24/82 (29%)
sdk1aXP_009297968.1 I-set 125..208 CDD:254352
Ig 125..204 CDD:299845
IG_like 222..302 CDD:214653
Ig 236..287 CDD:299845
Ig_3 322..394 CDD:290638
I-set 323..412 CDD:254352
I-set 416..505 CDD:254352 13/52 (25%)
Ig 436..500 CDD:299845 9/45 (20%)
I-set 510..600 CDD:254352 24/99 (24%)
Ig 527..600 CDD:299845 22/82 (27%)
I-set 605..693 CDD:254352 31/104 (30%)
Ig 610..693 CDD:299845 30/99 (30%)
FN3 697..788 CDD:238020 6/22 (27%)
fn3 800..886 CDD:278470
FN3 901..997 CDD:238020
FN3 1002..1090 CDD:238020
FN3 1100..1196 CDD:238020
FN3 1206..1301 CDD:238020
FN3 1308..1397 CDD:238020
FN3 1408..1501 CDD:238020
FN3 1507..1602 CDD:238020
FN3 1616..1722 CDD:238020
FN3 1732..1825 CDD:238020
FN3 1830..1919 CDD:238020
FN3 1931..2021 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.