DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and lrit1a

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:355 Identity:72/355 - (20%)
Similarity:116/355 - (32%) Gaps:146/355 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SSASAASTAISSDES---------GDPSS------------ATAFSSLAQVSSLLPEASALSATS 112
            |..|.|.:.|.:|..         ||.|.            :.|||.|:.:..|....:.||:.:
Zfish    35 SDGSRARSVICNDPEISLVPASFPGDTSKLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLN 99

  Fly   113 --------GLVEPYLDGYATSNVTTQ----------IGTH----AYLPCRVKQLGNKSVSWIRLR 155
                    .|.|..|||.:.|:...:          :..|    :.||... .|..|:::::.|.
Zfish   100 SDSFRGLYSLEELRLDGNSLSSFPWESLMDMPSLRLLDIHNNQLSSLPSEA-ALYMKNITYLDLS 163

  Fly   156 DGHILTVDRAV--------------------------FIADQRFLAIKQPDKYWTLQIKYVQAR- 193
            ..::|||...|                          ::.|.|...:.|..|..:|.:.::..| 
Zfish   164 SNNLLTVPAEVLNTWLTIKPTLGAESSKLILGLHDNPWLCDCRLYDLVQFQKSPSLSVAFIDTRL 228

  Fly   194 --------------DAGSYECQVSTEPKVSARVQLQVVVPRTEILGEPDRYVKAGSNVVLRCIVR 244
                          ||....||       ..||...|...|:.:          |:||:|||   
Zfish   229 RCADPESLSGVLFSDAELRRCQ-------GPRVHTAVARVRSAV----------GNNVLLRC--- 273

  Fly   245 GALEPPTFIMWYHGAEQLAADSRRHRTQLDPNLPEASGEGQSTIGSLIIESAKK----------- 298
            |.:..|.                       |.|.....:|:...|::::|::|:           
Zfish   274 GTVGVPI-----------------------PELAWRRADGKPLNGTVLLENSKEGIVWSILSVPA 315

  Fly   299 ---RDTGNYTCSPSN---SPSATVTLNIIN 322
               ||||.|.|..:|   |..|.::| |||
Zfish   316 VSYRDTGKYICKATNYAGSAEAVISL-IIN 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 23/145 (16%)
Ig 127..217 CDD:299845 22/144 (15%)
IG_like 227..320 CDD:214653 24/109 (22%)
IGc2 234..311 CDD:197706 21/93 (23%)
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378 5/22 (23%)
LRR_8 63..119 CDD:290566 12/55 (22%)
LRR_RI <77..175 CDD:238064 22/98 (22%)
leucine-rich repeat 85..108 CDD:275378 3/22 (14%)
LRR_8 108..167 CDD:290566 12/59 (20%)
leucine-rich repeat 109..132 CDD:275378 6/22 (27%)
leucine-rich repeat 133..156 CDD:275378 4/23 (17%)
leucine-rich repeat 157..170 CDD:275378 2/12 (17%)
LRRCT 199..243 CDD:214507 6/43 (14%)
I-set 252..343 CDD:254352 28/127 (22%)
Ig 259..333 CDD:299845 22/109 (20%)
fn3 448..515 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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