DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and Dscam3

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster


Alignment Length:312 Identity:70/312 - (22%)
Similarity:118/312 - (37%) Gaps:77/312 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LTIASHTQTSAEAAGGR--VSGPGAGTSEGAGTSSASAASTAISSDESGDPSSATAFSSLAQVSS 100
            ||.::|.:.::.|.||:  :.....|..:|        ..|.|....:|:.:...     .|::.
  Fly   579 LTTSNHYELASVADGGQLVIKNVEPGRDQG--------IYTCIVRSRAGEEARRD-----MQLNV 630

  Fly   101 LLPEASALSATSGLVEPYLDGYATSNVTTQIGTHAYLPCRVKQLGNKSVSWIRLRDGHILTVDRA 165
            ..|.         ::||:   ....|:  |.|..|.:.|.|.. |:..:.:...:|..  ::..:
  Fly   631 NSPP---------VIEPF---KFPKNL--QEGGRAQITCAVSS-GDMPIYFSWKKDDS--SIPSS 678

  Fly   166 VFIADQRFLAIKQPDKYWTLQIKYVQARDAGSYECQVS-TEPKVSARVQLQV-VVPRTEILGEP- 227
            :.|.:      |:.:.|..|..|.:.||.:|.|.|..| ...||:...:||| |.||...  || 
  Fly   679 LQITE------KKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRY--EPM 735

  Fly   228 DRYVKAGSNVVLRCIVRGALEPPTFIMWYHGAEQLAAD-----SRRHRTQLDPNLPEASGEGQST 287
            |..:..|:.:.:.|...|  .|...|.|:.|..:.:.|     .|.|                  
  Fly   736 DTAIMLGNTISINCEAEG--YPIPTITWFKGQGKGSKDFKPLSMRNH------------------ 780

  Fly   288 IGSLIIESAKKRDTGNYTCSPSNSPSA----TVTLNI---INGESSASAVTS 332
              ||::..|...|.|.|.|..:|...|    |:.:|:   ...|.||..::|
  Fly   781 --SLLLNLATDNDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSARNISS 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 22/91 (24%)
Ig 127..217 CDD:299845 23/91 (25%)
IG_like 227..320 CDD:214653 22/102 (22%)
IGc2 234..311 CDD:197706 17/81 (21%)
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706 10/47 (21%)
I-set 634..724 CDD:254352 24/112 (21%)
ig 645..712 CDD:278476 18/77 (23%)
IG_like 734..815 CDD:214653 22/102 (22%)
Ig 745..815 CDD:299845 19/91 (21%)
I-set 820..913 CDD:254352 4/11 (36%)
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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