Protein Alignment dpr11 and Cadm4

DIOPT Version :10

• Sequence 1: NP_788586.1
• Gene: dpr11 / 40800
• FlyBaseID: FBgn0053202
• Length: 360
• Species: Drosophila melanogaster
• Sequence 2: NP_001040572.1
• Gene: Cadm4 / 365216
• RGDID: 1304722
• Length: 388
• Species: Rattus norvegicus
• Alignment Length: 372
• Identity: 78/372 - (20%)
• Similarity: 115/372 - (30%)
• Gaps: 156/372 - (41%)

  Fly   101 LLPEASALSATSGLVEPYLDGYATSNVTTQIGTHAYLPCRVKQLGNKSVSWIRLRDGHILTVD-- 163
            ||..|:|...|:..|:       |.|||...|..|.:.||:.|.           ||.|:.:.
  Rat    13 LLWAAAAGPGTAQEVQ-------TENVTVAEGGVAEITCRLHQY-----------DGSIVVIQNP 59

  Fly   164 --RAVF------IADQRFLAIKQPDKYWTLQIKYVQARDAGSYECQVSTE--------------- 205
              :.:|      :.|:||...:...:...:::...:..|.|.|.||:.||
  Rat    60 ARQTLFFNGTRALKDERFQLEEFSPRRVRIRLSDARLEDEGGYFCQLYTEDTHHQIATLTVLVAP 124

  Fly   206 --PKVSAR--------VQLQVVVPRT-------------EILG-------------------EPD 228
              |.|..|        |:|..:|||:             |:.|                   ..|
  Rat   125 ENPVVEVREQAVEGGEVELSCLVPRSRPAAVLRWYRDRKELKGVSSGQENGKVWSVASTVRFRVD 189

  Fly   229 R-------------------------------------------YVKAGSNVVLRCIVRGALEP- 249
            |                                           .|:.|..:||.|.|.|  .|
  Rat   190 RKDDGGIVICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGDTLVLTCAVTG--NPR 252

  Fly   250 PTFIMWYHGAEQLAADSRRHRTQLDPNLPEASGEGQSTIGSLIIESAKKRDTGNYTCSPSNSPSA 314
            |..|.|..|.|.|            |...||.||      :|.:......|.|.|||..:|....
  Rat   253 PNQIRWNRGNESL------------PERAEALGE------TLTLPGLVSADNGTYTCEAANKHGH 299

  Fly   315 TVTLNIINGESSASAVTSSAATTRAYA-----LSILALLLSVILIGV 356
            ...|.::......:.|  .|.|:..||     |::|..|:..:|:|:
  Rat   300 ARALYVLVVYDPGAVV--EAQTSVPYAIVGGILALLVFLIICVLVGM 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dpr11	NP_788586.1	Ig	125..216	CDD:472250	27/125 (22%)
		Ig strand B	135..139	CDD:409353	1/3 (33%)
		Ig strand C	148..152	CDD:409353	0/3 (0%)
		Ig strand E	183..187	CDD:409353	0/3 (0%)
		Ig strand F	197..202	CDD:409353	2/4 (50%)
		IG_like	227..320	CDD:214653	29/136 (21%)
		Ig strand B	237..241	CDD:409544	2/3 (67%)
		Ig strand C	252..256	CDD:409544	1/3 (33%)
		Ig strand E	289..293	CDD:409544	1/3 (33%)
		Ig strand G	313..316	CDD:409544	0/2 (0%)
Cadm4	NP_001040572.1	Ig	29..120	CDD:472250	23/101 (23%)
		Ig strand B	40..44	CDD:409465	1/3 (33%)
		Ig strand C	53..57	CDD:409465	1/3 (33%)
		Ig strand E	87..91	CDD:409465	0/3 (0%)
		Ig strand F	101..106	CDD:409465	2/4 (50%)
		Ig strand G	113..116	CDD:409465	0/2 (0%)
		IgI_2_Necl-4	121..220	CDD:409468	12/98 (12%)
		Ig strand A	121..124	CDD:409468	0/2 (0%)
		Ig strand A'	127..131	CDD:409468	2/3 (67%)
		Ig strand B	139..149	CDD:409468	3/9 (33%)
		Ig strand C	152..161	CDD:409468	0/8 (0%)
		Ig strand C'	162..165	CDD:409468	0/2 (0%)
		Ig strand D	167..174	CDD:409468	1/6 (17%)
		Ig strand E	177..187	CDD:409468	0/9 (0%)
		Ig strand F	195..203	CDD:409468	0/7 (0%)
		Ig strand G	212..219	CDD:409468	0/6 (0%)
		Ig_3	224..295	CDD:464046	25/90 (28%)
		4.1m	344..362	CDD:128590	0/1 (0%)