DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and Lrit1

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_647547.2 Gene:Lrit1 / 246214 RGDID:628607 Length:623 Species:Rattus norvegicus


Alignment Length:298 Identity:62/298 - (20%)
Similarity:97/298 - (32%) Gaps:104/298 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 GDPSS--ATAFSSLAQVSSLLPEASALSATSGLVEPYLDGYATSNVTTQIGTHAYLPCRVKQLGN 146
            |.|.|  ..|||.|.......||          :.|     ..:::.:.:|:...|.|....:..
  Rat   233 GSPRSLAGVAFSQLELRKCQSPE----------LRP-----GVTSIISPLGSTVLLRCGATGIPG 282

  Fly   147 KSVSWIRLRDGHIL--TVDRAVFIADQRFLAIKQPDKYWT-LQIKYVQARDAGSYECQ------- 201
            ..:|| |..:|..|  ||.:.|          ......|| |.:..|...|:|.|.||       
  Rat   283 PEMSW-RRANGRPLNGTVHQEV----------SSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGA 336

  Fly   202 -------VSTEPKVSARVQLQVVVPRTEILGEPDRYVKAGSNVVLRCIVRGALEPPTFIMWY--- 256
                   :.|||:.|           ||..|.|                 |||       |.   
  Rat   337 SETLISLIVTEPQTS-----------TEYTGIP-----------------GAL-------WARTG 366

  Fly   257 HGAEQLAADSR---RHRTQL--------DPNLPEASGEGQSTIGSLIIESAKKRDTGNYTCSPSN 310
            .|||..|.:::   ||...:        .|::|....|       |.:::.:....|.::..||.
  Rat   367 EGAEAAAYNNKLVARHVPHVPEPVALATKPSVPSIKEE-------LPLQNFQMDVPGEFSREPSE 424

  Fly   311 SPSATVTLNI-INGES--SASAVTSSAATTRAYALSIL 345
            .....:..:: :.|::  |.|.|..:.......|.|:|
  Rat   425 HQETQMVRSLKVVGDTYHSVSLVWKAPQAGNTTAFSVL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 24/107 (22%)
Ig 127..217 CDD:299845 24/106 (23%)
IG_like 227..320 CDD:214653 18/106 (17%)
IGc2 234..311 CDD:197706 17/90 (19%)
Lrit1NP_647547.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..128
LRR_8 131..>176 CDD:290566
LRR_4 131..172 CDD:289563
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..205 CDD:275378
TPKR_C2 201..>240 CDD:301599 3/6 (50%)
Ig 257..345 CDD:299845 21/103 (20%)
IG_like 267..345 CDD:214653 20/88 (23%)
FN3 431..501 CDD:214495 7/32 (22%)
LRR 6 525..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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