DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and Lrit1

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_666357.2 Gene:Lrit1 / 239037 MGIID:2385320 Length:624 Species:Mus musculus


Alignment Length:299 Identity:64/299 - (21%)
Similarity:103/299 - (34%) Gaps:95/299 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SATAFSSLAQVSSLLPEASALSATSGLVEPYLDGYATSNVTTQIGTHAYLPCRVKQLGNKSVSWI 152
            :..|||.|.......||          :.|     ..:::.:.:|:...|.|....:....:|| 
Mouse   240 AGVAFSQLELRKCQSPE----------LRP-----GVTSIISPLGSTVLLRCGATGIPGPEMSW- 288

  Fly   153 RLRDGHIL--TVDRAVFIADQRFLAIKQPDKYWT-LQIKYVQARDAGSYECQVSTEPKVSARVQL 214
            |..:|..|  ||.:.|          ......|| |.:..|...|:|.|.||..           
Mouse   289 RRANGRPLNGTVHQEV----------SSDGSSWTLLDLPVVSLFDSGDYICQAK----------- 332

  Fly   215 QVVVPRTEILGEPDRYVKAGSNVVLRCIVRGALEPPTF--------IMWY---HGAEQLAADSR- 267
                   ..||        .|..::..||   .||.|.        ::|.   .|||..|.::: 
Mouse   333 -------NFLG--------ASETLISLIV---TEPQTSTGYSGIPGVLWARTGEGAEAAAYNNKL 379

  Fly   268 --RHRTQLDPNLPE----ASGEGQSTI-GSLIIESAKKRDTGNYTCSPSNSPSATVTLNI-INGE 324
              ||    .|::||    |:.....:| ..|.:::.:....|.::..||....|.:..:: :.|:
Mouse   380 VARH----VPHMPEHVALATKPSMPSIKEELALQNFQMDVPGEFSREPSEHQEAQMVRSLKVVGD 440

  Fly   325 S--SASAV--TSSAATTRAYALSILALLLSVILIGVGHR 359
            :  |.|.|  ...|..|.|:         ||:....|||
Mouse   441 TYHSVSLVWKAPQAGNTTAF---------SVLYAVFGHR 470

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 20/93 (22%)
Ig 127..217 CDD:299845 20/92 (22%)
IG_like 227..320 CDD:214653 23/111 (21%)
IGc2 234..311 CDD:197706 22/95 (23%)
Lrit1NP_666357.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..129
LRR_8 131..>176 CDD:290566
LRR_4 131..172 CDD:289563
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..205 CDD:275378