DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and Ptprq

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:359 Identity:67/359 - (18%)
Similarity:117/359 - (32%) Gaps:118/359 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GTSEGAGTSSASAASTAISSDES--GDPSSATAFSSLA------QVSSLLPEASALSATSGLVEP 117
            |...||.|...|:|...|::.||  .||.:...|..:.      |:|.|.|     |..:|.::.
Mouse  1619 GNVSGAYTDGKSSAEVIITTLESVPKDPPNNMTFQKIPDEVTKFQLSFLPP-----SQPNGNIQV 1678

  Fly   118 YLDGYATSNVTTQIGTHAYLPCRVKQLGNKSVSWIRLRDGHILTVDRAVFIADQRFLAIKQPDKY 182
            |.......:..|.:..|             ::|.|:..|..::.:          ...:|....|
Mouse  1679 YQALVYREDDPTAVQIH-------------NLSIIQKTDTSVIAM----------LEGLKGGHTY 1720

  Fly   183 WTLQIKYVQARDAGSYECQVSTEPKVSARVQLQVVV---PRTEILGEPD---RYVKAGSNVVLRC 241
             .:.:..:.:..||         |||..|:.:.:..   |:|:.:...|   :.:...:.:.:|.
Mouse  1721 -NISVYAINSAGAG---------PKVQMRITMDIKAPARPKTKPIPIHDATGKLLVTSTTITIRM 1775

  Fly   242 IV-------------------RGALEPPTFIMWYHGAEQLAADSRRHRTQLD-PNLPEASGE--- 283
            .:                   .||.:......||   :.....:|.:.|... ||.|...|:   
Mouse  1776 PICYYNDDHGPIRNVQVLVAEAGAQQDGNVTKWY---DAYFNKARPYFTNEGFPNPPCIEGKTKF 1837

  Fly   284 -GQSTIGSLIIESA-----------------------KKRDT---GNYTCSPSNSPSATVTLNII 321
             |...|..:..::|                       |.|.|   |.:|.|..:.|..|:     
Mouse  1838 SGNEEIYVIGADNACMIPGNEEKICNGPLKPKKQYLFKFRATNVMGQFTDSEYSDPIKTL----- 1897

  Fly   322 NGESSASAVTSSAATTRAYALSILALLLSVILIG 355
             ||..:.       .|....||:...:||:||:|
Mouse  1898 -GEGLSE-------RTVEIILSVTLCILSIILLG 1923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 13/90 (14%)
Ig 127..217 CDD:299845 13/89 (15%)
IG_like 227..320 CDD:214653 23/145 (16%)
IGc2 234..311 CDD:197706 20/126 (16%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020
fn3 399..>441 CDD:365830
FN3 570..654 CDD:238020
fn3 668..744 CDD:365830
FN3 762..850 CDD:238020
fn3 857..934 CDD:365830
FN3 951..1049 CDD:238020
FN3 1056..1137 CDD:238020
FN3 1152..1233 CDD:238020
FN3 1247..1337 CDD:238020
FN3 1342..1421 CDD:238020
FN3 1432..1535 CDD:238020
FN3 1542..1638 CDD:238020 7/18 (39%)
FN3 1645..1734 CDD:238020 19/126 (15%)
UP_III_II 1759..1928 CDD:297589 33/181 (18%)
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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