DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr11 and nitr3d

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_938169.2 Gene:nitr3d / 171006 ZFINID:ZDB-GENE-020225-34 Length:223 Species:Danio rerio


Alignment Length:146 Identity:39/146 - (26%)
Similarity:53/146 - (36%) Gaps:35/146 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 EPDRYVKAGSNVVLRCIVRGALEPPTFIMWY-HGAEQ---LAADSRRHRTQLDPNLPEASGEGQ- 285
            :|....:.||:|.|.|.  .:.:..|.|.|| |.|.:   |.|.|.       ||....:.:.. 
Zfish    27 QPLVVAELGSSVTLPCF--HSDDFITTISWYKHSAGKKPLLIAHSA-------PNSGRVTYQNAF 82

  Fly   286 -------STIGS----LIIESAKKRDTGNYTCSPSNSPSATVTLNII---NGESSASAVTSSAAT 336
                   .||.|    |.|...:|.|...|.|       |...|||:   .|.......|:...|
Zfish    83 NNTNRFFITIASGSYNLSILHLEKEDFATYYC-------AKFFLNIMMFGEGTILLHNETNIIIT 140

  Fly   337 TRAYALSILALLLSVI 352
            ..:...|.:.|:||||
Zfish   141 PESSFWSPVVLILSVI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352
Ig 127..217 CDD:299845
IG_like 227..320 CDD:214653 28/108 (26%)
IGc2 234..311 CDD:197706 25/92 (27%)
nitr3dNP_938169.2 V-set 26..130 CDD:311561 31/118 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1457433at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.