DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and Dscaml1

DIOPT Version :9

Sequence 1:NP_001262320.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:270 Identity:71/270 - (26%)
Similarity:104/270 - (38%) Gaps:55/270 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LAQVSSLLPEASALSATSGLVEPYLDGYATSNVTTQ--------------IGTHAYLPCRVKQLG 145
            |..|...:.|...|  .|.|::|.|....:.:|..:              ||...|:||.|.. |
Mouse   561 LTDVQKGMDEGEYL--CSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIGQLLYIPCVVSS-G 622

  Fly   146 NKSVSWIRLRDGHILTVDRAVFIADQRFLAIKQPDKYWTLQIKYVQARDAGSYECQVS-TEPKVS 209
            :..:.....:||.::.....|.|..:.|::        :|||..|..:..|:|.|..| ....||
Mouse   623 DMPIRITWRKDGQVIISGSGVTIESKEFMS--------SLQISSVSLKHNGNYTCIASNAAATVS 679

  Fly   210 ARVQLQVVVPRTEILGEPDR----YVKAGSNVVLRCIVRGALEPPTFIMWYHGAEQLAADSRRH- 269
            ...||.|.||...:: :|:.    |.|||   ||.|.|.|  .||..:||.| |:......:.| 
Mouse   680 RERQLIVRVPPRFVV-QPNNQDGIYGKAG---VLNCSVDG--YPPPKVMWKH-AKGSGNPQQYHP 737

  Fly   270 -----RTQLDPNLPEASGEGQSTIGSLIIESAKKRDTGNYTCSPSNSPSATVTLNIINGESSASA 329
                 |.|:.||            .||:|....:.|.|.|.|..||.....::..:.......:.
Mouse   738 VPLTGRIQILPN------------SSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAM 790

  Fly   330 VTSSAATTRA 339
            :||...||.|
Mouse   791 ITSHPNTTIA 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_001262320.1 I-set 125..216 CDD:254352 25/105 (24%)
Ig 127..217 CDD:299845 25/104 (24%)
IG_like 227..320 CDD:214653 30/102 (29%)
IGc2 234..311 CDD:197706 25/82 (30%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005
Ig 408..498 CDD:353325
IGc2 519..577 CDD:197706 4/17 (24%)
Ig 615..681 CDD:319273 19/74 (26%)
Ig_DSCAM 707..785 CDD:143211 26/95 (27%)
Ig 803..891 CDD:353325
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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