DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr11 and lsamp

DIOPT Version :10

Sequence 1:NP_788586.1 Gene:dpr11 / 40800 FlyBaseID:FBgn0053202 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:263 Identity:77/263 - (29%)
Similarity:107/263 - (40%) Gaps:38/263 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LAQVSSLLPEASALSATSGLVEPYLD-GYATSNVTTQIGTHAYLPCRVKQLGNKSVSWIRLRDGH 158
            |.::..|||  :.|...||      | ..:|.|:|.:.|..|.|.|.|:...:: |:|:. |.|.
 Frog    16 LLRLLCLLP--TGLPVRSG------DFNRSTDNITVRQGDTAILRCFVEDRSSR-VAWLN-RSGI 70

  Fly   159 ILTVDRAVFIADQRFLAIKQPDKYWTLQIKYVQARDAGSYECQVSTEPKV-SARVQLQVVVPRTE 222
            |...|.. :..|.|....|:....::|:|:.|...|.|.|.|.|.|:... :.:|.|.|.||...
 Frog    71 IFAGDDK-WSLDPRVELEKRSLLEYSLRIQKVDVSDEGPYTCSVQTKQHTKTTQVYLIVQVPPKI 134

  Fly   223 ILGEPDRYVKAGSNVVLRCIVRGALEPPTFIMWYHGAEQLAADSRRHRTQLDPNLPEASGEGQST 287
            .....|..|..||||.|.||..|..||  .|.|            ||.|......|....||:..
 Frog   135 SNISADITVNEGSNVTLMCIAYGRPEP--MITW------------RHLTPTAGTSPARDFEGEEE 185

  Fly   288 IGSLIIESAKKRDTGNYTCSPSNSPSAT------VTLN---IINGESSASAVTSSAATTRAYALS 343
            .  |.|:...:..:|.|.|..:|..::.      ||:|   ||....|..|.|...|..|..|.:
 Frog   186 F--LEIQGITREQSGRYECKAANEVASADVKQVRVTVNYPPIITESKSNEATTGKQAILRCEASA 248

  Fly   344 ILA 346
            :.|
 Frog   249 VPA 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr11NP_788586.1 Ig 125..216 CDD:472250 27/91 (30%)
Ig strand B 135..139 CDD:409353 2/3 (67%)
Ig strand C 148..152 CDD:409353 1/3 (33%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 2/4 (50%)
IG_like 227..320 CDD:214653 29/101 (29%)
Ig strand B 237..241 CDD:409544 2/3 (67%)
Ig strand C 252..256 CDD:409544 1/3 (33%)
Ig strand E 289..293 CDD:409544 1/3 (33%)
Ig strand G 313..316 CDD:409544 0/8 (0%)
lsampXP_031751462.1 Ig 38..128 CDD:472250 28/92 (30%)
Ig strand B 49..53 CDD:409353 2/3 (67%)
Ig strand C 61..65 CDD:409353 1/4 (25%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 0/2 (0%)
Ig_3 131..206 CDD:464046 26/90 (29%)
Ig_3 223..302 CDD:464046 9/29 (31%)

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