DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurochondrin and Neurochondrin

DIOPT Version :10

Sequence 1:NP_649658.1 Gene:Neurochondrin / 40796 FlyBaseID:FBgn0037447 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_003436800.1 Gene:Neurochondrin / 11175688 VectorBaseID:AGAMI1_002704 Length:733 Species:Anopheles gambiae


Alignment Length:730 Identity:456/730 - (62%)
Similarity:576/730 - (78%) Gaps:9/730 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVPEPVRKCASLLKGTKSDTEKFAALFMVTKLVKGKDCNAAGKKLLFEAIGFPFLKKLLVSKDLP 67
            :|.||::||:.:||..||||||||||||||||:||||||.|||:||||:|||.||:|||.|||:|
Mosquito     4 EVSEPIKKCSLILKNAKSDTEKFAALFMVTKLIKGKDCNQAGKRLLFESIGFDFLRKLLTSKDVP 68

  Fly    68 NDCPPLVYKSVALSILTCFCQEEELATHKDIIDAIPTLLEIVEQADDEDYEDNLIVVSEAYSCLK 132
            :|||..||:|||||||:|||.:|:||||:|::|:||..:.||...||::|:||||:::|||.||:
Mosquito    69 DDCPASVYQSVALSILSCFCDDEQLATHQDMLDSIPVFMGIVSTCDDDEYDDNLIIINEAYHCLQ 133

  Fly   133 SIASHEPGQQALLATGAIPKMSQIYSAQSFQTDEALHLIVLLVKQFGVVSWPEDPTAFHALIQRI 197
            ||:.:|.|:.||.....|.||:|||:.:|||.||||.|||.||.:||..||..||..||||:||:
Mosquito   134 SISLYESGRLALRQHDVITKMAQIYTQRSFQIDEALTLIVTLVARFGANSWDNDPKLFHALLQRV 198

  Fly   198 ALDMETDDTERKYELCRILADILITCRREIVINSLEGQIWPESLFKGCGDILKAKIGPKQRDPAL 262
            :||.|||..|||:||..:::.:|..|||::|..:::|:||||.|:||..||||:|||..||||||
Mosquito   199 SLDFETDHAERKFELAEMISSLLFHCRRDLVARTVQGEIWPECLYKGISDILKSKIGKAQRDPAL 263

  Fly   263 HLIATTLHVLGIQWAFMDEQ--KTFFLQLLQLGAIEVRMQMDEKKLETTFKQAELLTCCFSILEH 325
            .|.|..:.||||:|...|.:  |.|||.||||.|||||||||.|......:||:|:|.||.|||.
Mosquito   264 KLAANAVDVLGIEWTLHDVENPKKFFLLLLQLAAIEVRMQMDNKSFNQCVQQADLITACFIILEL 328

  Fly   326 CIEYMATDQLDLEPKEKQTTYTALKGAFNQVLAVLTRVSQDKIRESSNPKDKKFVFAIVKVLSAW 390
            .|.:|:||||||:.|:||..||.|||||:.||.||.:::.|..::.....:|.|.:|:|:||:||
Mosquito   329 SINFMSTDQLDLDQKDKQQVYTGLKGAFSAVLGVLVKLANDTKKDRLQKTEKAFAYAMVRVLTAW 393

  Fly   391 LAQETTAMRPAIYKLLPFMLKVANESFQELKTWRAGTR-------EGEPPIDVLRIMLPALCHFA 448
            |||||:||:..:.|:|||:.|:|||||.|.:.:|...:       |.:||.|:||:||||:||..
Mosquito   394 LAQETSAMKNQVSKVLPFLFKLANESFYESRDYRIAHKADNVDDHEQQPPADILRVMLPAICHLV 458

  Fly   449 VEEEARRVLFTHKQDEVLLESLEFYFSIAHWKRPPIPRAERLKRMNEPDPVPTPEQQAEMKVARS 513
            ||||||::....|:::||.:.|.|::||||:|:||:||||||||||||||..||:|..:||.:|:
Mosquito   459 VEEEARQIFLKEKEEQVLYDCLLFHWSIAHYKKPPVPRAERLKRMNEPDPEMTPQQLDDMKDSRT 523

  Fly   514 AIVALCNILMNFTVLEPKKAEDGPTFANLLKFVVENLPELKDTPDNLVIHGNLAVLGLLLLKQQS 578
            |||:|||||||.||||.|..|:...||.||:|:.||||||||.|||||:||:||||||||||||:
Mosquito   524 AIVSLCNILMNITVLEAKLVEESTLFAQLLRFIFENLPELKDIPDNLVMHGHLAVLGLLLLKQQA 588

  Fly   579 KKVKQNDFSICRYIQATIRFLWDAYNIDESNDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLP 643
            .|:|:||||||||||.|||||||||||||||||.|||||:.||.:|.::.||||||||||.|::.
Mosquito   589 SKIKKNDFSICRYIQTTIRFLWDAYNIDESNDPQALVVSMQYKEHWFEIMELWFLGMQTMSGIIK 653

  Fly   644 LVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQLVDVNGDVQAVLKKADALRVC 708
            |:||:||||:|||||||||:||:||||||||.|||.|||||||||||.|..|..||||||||:||
Mosquito   654 LIPWISEFAIESGWAEGIVETLRKVKIGTLPPNVKLAYEDFLSQLVDANPAVAPVLKKADALKVC 718

  Fly   709 RNHRMMDLGKKLFGD 723
            |||||||||||||||
Mosquito   719 RNHRMMDLGKKLFGD 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NeurochondrinNP_649658.1 Neurochondrin 2..631 CDD:336138 379/636 (60%)
NeurochondrinXP_003436800.1 Neurochondrin 3..641 CDD:336138 388/645 (60%)

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