DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zif and si:dkey-56e3.3

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_005160137.1 Gene:si:dkey-56e3.3 / 797788 ZFINID:ZDB-GENE-050411-91 Length:575 Species:Danio rerio


Alignment Length:448 Identity:102/448 - (22%)
Similarity:164/448 - (36%) Gaps:128/448 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LAQSERL--QRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGI-CKSCKVELNMAYQFRE 75
            |.|.:||  |...:..|:||  |:.::|            :|..|:.. |:..:.|.......::
Zfish   141 LQQQQRLDQQAYHQSVEDGE--PDVLII------------KEERPENTRCEQSEREKQTTENHKD 191

  Fly    76 KALRKQMEI--------------EEYCRELGLL-DESDVMMIKEEDGSQQQCD------------ 113
            :||.|...:              .::|.:..:. |||||::||||.....:|:            
Zfish   192 EALNKSSGVCVAGHRENFIDQNTVQHCHQEPVADDESDVIIIKEERPDNMRCERSETELNATNNN 256

  Fly   114 --------------EEMYILEETTTGEEEHQEEKG------HEEYLEV------------DTSDQ 146
                          .|.||.::|.  :..|||...      .:|..||            ||..:
Zfish   257 GTQYGSAGVFVPVHRESYIDQDTV--QHCHQESDAIQPDLLQDENTEVNAIDEDTHLLNGDTRME 319

  Fly   147 QECIGDTIEYLE-------------------DNYT-IEMNSDQTEIVLESEKQY----------- 180
            :.|.|:....|:                   .:|| .|.|..      .|..||           
Zfish   320 RRCDGEVDSNLQPVSSYASWVSRRFDASANHPSYTESECNGG------PSVNQYLMYRGSTDPMC 378

  Fly   181 -EETP--SQQLALQEAAKASLKARRGRVRRGLN-------SLTTSDG---TEKGGYICDVCGNFY 232
             ..||  |..|::............|.:.:...       |...||.   ..|..::|..||..:
Zfish   379 SYATPINSNSLSVSNIEGHLTHDNEGNISQSEQPPFTPCFSFKQSDSPHMQRKDRFMCKHCGKVF 443

  Fly   233 EKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSH 297
            .:.|.::.|::.|.....:.|.||..:|.....|::|...|.|.||::|..|.:.|..:|.||.|
Zfish   444 SQPGTLLLHQKLHTRERLHNCTLCGKRFSQASSLKRHHSIHRGEKPFRCQHCGKHFSDQSNLKKH 508

  Fly   298 ENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEE 355
            ..||.|.|||.|.:|.|.|..:.:|..|..||:..|.:.||.|.:.|...:.:.:|::
Zfish   509 VTVHTGEKPYGCSLCGKMFNQSSNLKTHMKIHTREKPFGCDRCGRMFAHKYILVKHQQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 17/89 (19%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 37/106 (35%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..288 CDD:290200 8/21 (38%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 294..318 CDD:290200 13/23 (57%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
C2H2 Zn finger 337..353 CDD:275368 4/15 (27%)
si:dkey-56e3.3XP_005160137.1 COG5048 <328..553 CDD:227381 58/230 (25%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
C2H2 Zn finger 464..484 CDD:275368 6/19 (32%)
zf-H2C2_2 476..500 CDD:290200 8/23 (35%)
zf-C2H2 490..512 CDD:278523 7/21 (33%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
zf-C2H2 520..540 CDD:278523 6/19 (32%)
zf-H2C2_2 532..557 CDD:290200 9/24 (38%)
C2H2 Zn finger 548..565 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I4629
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.050

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