DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and Zfp942

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001185977.1 Gene:Zfp942 / 73233 MGIID:1920483 Length:486 Species:Mus musculus


Alignment Length:361 Identity:88/361 - (24%)
Similarity:144/361 - (39%) Gaps:86/361 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAYQFREKALRKQMEIEEYC 88
            |..|:...||.|..       .:...|.||......|.:|   ||:                  |
Mouse   104 DNFRDTHVESSNVN-------RHETGNTREPCKYKNCVNC---LNL------------------C 140

  Fly    89 RELGLLDESDVMMIKEEDGS--QQQCDEEMYI-LEETTTGEEEHQEEKGHEEYLEVDTSDQQECI 150
            ..:| |::...:..||.:|:  .:..|.:..: |::|.:|::.::            .|:...| 
Mouse   141 STIG-LNQGLHIGKKEHNGTVLNKVFDSKQILGLKQTNSGKKPYR------------CSECSRC- 191

  Fly   151 GDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQQ-------LALQEAAKASLKARRG----- 203
                      :|.:....|.:.:...||.|:.:...:       |::.:....|.|..:.     
Mouse   192 ----------FTKKCKLRQHQTIHTGEKPYKCSECDKCFFYKYSLSIHQRFHTSEKLYKCSECDK 246

  Fly   204 --------RVRRGLNSLTTSDGTEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKF 260
                    |:.:.::       |.:..|.|..|...:.::..:..|:|.|.|...|.|..||..|
Mouse   247 CFTFKSVLRIHQRIH-------TGEKPYKCSKCEKSFTRKSNLRIHQRIHTGEKPYKCSECDKCF 304

  Fly   261 QVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKH 325
            ..:...|.|...|||.||||||.|.:.|..:|.|:.|:.:|.|.|||.|..|||.|.|.|:|:.|
Mouse   305 TFKNTHRIHQRIHTGEKPYKCSECEKSFTRKSHLRIHQRIHTGEKPYKCSECDKCFTYEHTLSNH 369

  Fly   326 ELIHSDIKLYRCDYCNKDF----RLLHHMRQHEETK 357
            :.||:..|.|:|..|:|.|    .|:.|.:.|...|
Mouse   370 QRIHTGQKPYKCSECDKCFTRKCNLIIHQKIHTGEK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 12/62 (19%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 47/112 (42%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..353 CDD:275368 6/19 (32%)
Zfp942NP_001185977.1 KRAB 15..52 CDD:460171
C2H2 Zn finger 185..205 CDD:275368 4/30 (13%)
zf-H2C2_2 198..220 CDD:463886 4/21 (19%)
C2H2 Zn finger 213..233 CDD:275368 1/19 (5%)
COG5048 <237..397 CDD:227381 54/166 (33%)
C2H2 Zn finger 241..261 CDD:275368 1/19 (5%)
C2H2 Zn finger 269..289 CDD:275368 4/19 (21%)
C2H2 Zn finger 297..317 CDD:275368 6/19 (32%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 9/19 (47%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
SFP1 <403..481 CDD:227516 1/3 (33%)
C2H2 Zn finger 409..429 CDD:275368
C2H2 Zn finger 437..457 CDD:275368
C2H2 Zn finger 465..485 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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