DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zif and Zfp936

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001030065.1 Gene:Zfp936 / 668620 MGIID:3642994 Length:456 Species:Mus musculus


Alignment Length:103 Identity:23/103 - (22%)
Similarity:37/103 - (35%) Gaps:28/103 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EDWMDYKNRE------RRASTAT-TETIQSLK---NGKYQLYDEYKGRLSKTPSSTP-APPPPQ- 89
            ||...:..||      ||..|:: ||.:.:.|   ..:....|:....:...|..:| |.|||: 
Mouse   486 EDLGRFVGREEPEAIQRRPPTSSGTEAVVTPKPKPRQRLTFVDKKVSFVDTMPHPSPEASPPPKD 550

  Fly    90 ----------------PVVSTPAKAKRQCKFDNLAGNS 111
                            |.|:.|:|.....|.:...|.:
Mouse   551 IKHNSPEVGPETENSMPAVACPSKESSVAKVEENMGKT 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 14/60 (23%)
C2H2 Zn finger 225..245 CDD:275368
COG5048 <250..369 CDD:227381
C2H2 Zn finger 253..273 CDD:275368
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 309..329 CDD:275368
C2H2 Zn finger 337..353 CDD:275368
Zfp936NP_001030065.1 KRAB 4..44 CDD:460171
COG5048 <76..420 CDD:227381
C2H2 Zn finger 151..171 CDD:275368
C2H2 Zn finger 179..199 CDD:275368
C2H2 Zn finger 207..227 CDD:275368
C2H2 Zn finger 235..255 CDD:275368
C2H2 Zn finger 263..283 CDD:275368
C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 347..367 CDD:275368
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 403..423 CDD:275368
zf-H2C2_2 416..440 CDD:463886
C2H2 Zn finger 431..451 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.