DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and ZNF398

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_011514741.1 Gene:ZNF398 / 57541 HGNCID:18373 Length:647 Species:Homo sapiens


Alignment Length:129 Identity:42/129 - (32%)
Similarity:65/129 - (50%) Gaps:0/129 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 CDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFF 289
            |..||..:..:..::.|:|.|.....::|..|...|.....|.:|...|||.:||.|:.||:.|.
Human   462 CAQCGRSFSLKISLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFM 526

  Fly   290 YESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQH 353
            .:..|.:|..:|.|.:|:.|..|.|:|...|.|.||:.||:..:.|.|.||.:.||....::.|
Human   527 RKEHLLNHRRLHTGERPFSCPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDH 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 36/104 (35%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
C2H2 Zn finger 337..353 CDD:275368 5/15 (33%)
ZNF398XP_011514741.1 KRAB 148..206 CDD:214630
COG5048 <349..593 CDD:227381 42/129 (33%)
C2H2 Zn finger 377..397 CDD:275368
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 462..482 CDD:275368 5/19 (26%)
C2H2 Zn finger 490..510 CDD:275368 5/19 (26%)
C2H2 Zn finger 518..538 CDD:275368 6/19 (32%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
C2H2 Zn finger 574..592 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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