DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG4424

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:386 Identity:109/386 - (28%)
Similarity:154/386 - (39%) Gaps:86/386 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRVELTPQT-CRVCLAQSER-----LQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGI 59
            |.:.|...| ||.||...|.     .|..|: |..|..|..:.:..|.|:........|.:|..|
  Fly     1 MEIRLNMMTLCRTCLQDGEAHMVSIFQTADD-RLPGGVSLCDKIESLSGIQIRATAKEEVLPTRI 64

  Fly    60 CKSCKVELNMAYQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTT 124
            |..||..|.:|::||:...|.    .|:.||..:.|..:..::||             ::::|..
  Fly    65 CLRCKAFLTLAHKFRQICQRS----NEFLREYVIKDAVEQGVVKE-------------VVQQTRP 112

  Fly   125 GE----EEHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPS 185
            ..    |..|.|...:|.||                              |.|..:|...||||.
  Fly   113 STPPPIETEQLEPPEDEVLE------------------------------EGVWSTEDPIEETPH 147

  Fly   186 -------------QQLALQEAAKASL--KARRGRVRRGLNSLTTSDGTEKGGYICDVCGNFYEKR 235
                         :.|.......||.  .|..|.|:..|             ::|.:|||.|.::
  Fly   148 GPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGKL-------------HVCAICGNGYPRK 199

  Fly   236 GRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENV 300
            ..:..|.|||:....|.||:|...|.|..||::|:..|||:|||.|.:|.|.|...:.|..||..
  Fly   200 STLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERT 264

  Fly   301 HRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLHQN 361
            ||..:||.||.|.|.|.||..|..|...|:..|.:.|..|||.|..:|::..|.:|:.|.|
  Fly   265 HRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHIN 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 24/83 (29%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
COG5048 <250..369 CDD:227381 47/112 (42%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 25/86 (29%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
COG5048 210..>345 CDD:227381 47/116 (41%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)

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