DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG6808

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster


Alignment Length:389 Identity:102/389 - (26%)
Similarity:172/389 - (44%) Gaps:54/389 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRVELTPQTCRVCLAQSER--LQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSC 63
            |.:.:....||.|..:..:  ||.|      .|.:.:::||...|.|   :...:.:||.||..|
  Fly     1 MEISIKWSMCRTCRKKGTQSTLQSL------FESNAHKLLISYAGTS---VKPDDGLPDQICTVC 56

  Fly    64 KVELNMAYQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTTG--- 125
            .::|....:|.....:....:....|:. |...|....::::|    |.:::....::..:|   
  Fly    57 LMQLEEVDRFLSACKQSDAHLRSLVRQT-LSSASAFETLEDKD----QLEQKKRARKQNISGRLI 116

  Fly   126 EEEHQEEKGHEEYLEVDTSDQ----QECIGDTI-----------EYLEDNYTI-EMNSDQTEIVL 174
            ||.....|..|..||....|:    .:...|.:           :..:::||| :|:.|: ||  
  Fly   117 EENPINFKTQENALETTKDDEILPINKFSSDFVFDLNVNAENEKDIHQEDYTISDMDLDR-EI-- 178

  Fly   175 ESEKQYEETPSQQLALQEAAKASLKARRGRVRRGLNSLTTSD--------GTEKGGYICDVCGNF 231
             |::.|.||.||:   ..||..|::    ......::|..|.        ..|...|.|.:|.|.
  Fly   179 -SDQNYSETYSQE---SSAATDSIQ----ETSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNT 235

  Fly   232 YEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKS 296
            |....::..|.:.|.....:.||:|...|:....|:.||.:|||.|||:|.:|||:|...|..:.
  Fly   236 YRCLSQLNAHSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRK 300

  Fly   297 HENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLHQ 360
            ||.:|...:||.|.:|.|.|:.:.|...|..:||..|.::|..|.|:|||.|.:..||::..|:
  Fly   301 HERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKSLAHR 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 18/79 (23%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 43/111 (39%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
zf-H2C2_2 266..288 CDD:290200 13/21 (62%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 294..318 CDD:290200 9/23 (39%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
C2H2 Zn finger 337..353 CDD:275368 7/15 (47%)
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 18/78 (23%)
C2H2 Zn finger 229..249 CDD:275368 5/19 (26%)
zf-C2H2 255..277 CDD:278523 7/21 (33%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
zf-H2C2_2 269..293 CDD:290200 13/23 (57%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
zf-H2C2_2 299..321 CDD:290200 8/21 (38%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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