DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG6689

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:490 Identity:113/490 - (23%)
Similarity:188/490 - (38%) Gaps:141/490 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VELTPQTCRVCLAQSERLQRLDEIR------------EEGEESPNEMLI----QLLGVSYSNLND 51
            :||.|      |:..|:|:.|.:.|            ::..:..|.:|:    .:.||..|:..|
  Fly   150 MELDP------LSGEEKLEELQKCRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWISHKPD 208

  Fly    52 REHIPDGICKSCKVELNMAYQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEM 116
            .   |..:|.:||..|:.|..|||..:..::::.:      ....:|.:.|:.|:.:....|.: 
  Fly   209 E---PRLMCPACKSALDQAIDFREMCISTELKLSQ------AKPSTDEVQIEAENENPISSDHD- 263

  Fly   117 YILEETTTGEEEHQEEKGHEEYLEVDTSD---QQECIGDTIE--YLEDNYTIEMNSDQTEIVLES 176
             ::.:|.....|..|:.|.:...:..|||   .||.:.:..|  ..:|..::.:.:   :|..|.
  Fly   264 -LISDTENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDEVAESPAAQDPLSVALGA---KIFKEL 324

  Fly   177 EKQYEETPSQQLALQEAA------KASLKAR-RGRVRRGLNSLTTSD---------GTEKGGYIC 225
            ..||  |..::..|::.|      ||..||. ..:.:|..|..|..:         ..:...::|
  Fly   325 LDQY--TGKEKARLRKGAPIASKPKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVC 387

  Fly   226 DVCG-----------------------------NFYEKRGRMMEHRRRHD-------GIC----- 249
            |.||                             .||:...|.|..|.||.       |.|     
  Fly   388 DQCGQAFRMSHNLRIHMLRHTRTKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFA 452

  Fly   250 ------------------------------------QYACELCDAKFQVREQLRKHMYSHTGSKP 278
                                                :|.|:||...:..:..|..|:.|||.:..
  Fly   453 YPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANA 517

  Fly   279 YKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKD 343
            |||..||:.:...:.||.||..|.. :|..|.||.|.|.....|.:|||||:..:.|.|:.||.:
  Fly   518 YKCQRCSKSYSDPNKLKRHEMTHEK-RPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVN 581

  Fly   344 FRLLHHMRQHEETKLHQ-NAVMLAESMKVEMVAEQ 377
            ||..::|:.|..:|:|| ||..|.   .|::||.:
  Fly   582 FRYKYNMKSHANSKMHQDNARKLG---VVQIVATE 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 20/93 (22%)
C2H2 Zn finger 225..245 CDD:275368 9/48 (19%)
COG5048 <250..369 CDD:227381 45/119 (38%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262 16/83 (19%)
zf-C2H2 385..407 CDD:395048 4/21 (19%)
C2H2 Zn finger 387..407 CDD:275368 4/19 (21%)
C2H2 Zn finger 415..436 CDD:275368 5/20 (25%)
C2H2 Zn finger 444..460 CDD:275368 2/15 (13%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 9/19 (47%)
zf-met 573..597 CDD:463736 9/23 (39%)
C2H2 Zn finger 575..591 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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