DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG4820

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster


Alignment Length:354 Identity:80/354 - (22%)
Similarity:136/354 - (38%) Gaps:58/354 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CRVCLAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAYQFR 74
            ||.|    .:....||..:....:..::|..:..::...|.:.:.:|:.||..|:|.|:...:||
  Fly     5 CRTC----GKTVVADECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQKFR 65

  Fly    75 EKALRKQMEIEEY-CRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTTGE-----------E 127
                |:..:||:| .|....::..:.....|:...||....:...::|..:..           |
  Fly    66 ----RRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPLGIDELMSASDIKIEPIQLQME 126

  Fly   128 EHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQQLALQE 192
            |..:....|..||...| .....|:.|..|.::|    ...|||:...:.:     |:|:.: :.
  Fly   127 EDPQAPYPENQLEQALS-YGNAPGEDILPLPEDY----GEAQTEVATTTNE-----PAQRRS-KN 180

  Fly   193 AAKASLKARRGRVRRGL-----------NSLTTSDGTEKGGYICDVCGNFYEKRGRMMEHRRRHD 246
            .||...|....||.|.|           ..:...:|......||:.||..::....:..|..||.
  Fly   181 TAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHT 245

  Fly   247 GICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHEN------------ 299
            |...:.|:.|..|......||:|...|| ..||.|:||..::...|....||.            
  Fly   246 GTKPFECDQCHQKCYTLHLLRRHQLKHT-EGPYACTFCGLEYSTNSSRVRHEREACKKGRAPQSK 309

  Fly   300 ---VHRGIKPYVCKVCDKAFAYAHSLTKH 325
               :.:|.:.:.|:|||..|..|.:.|:|
  Fly   310 WEIIKKGERTFHCEVCDLWFLRAGNFTQH 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 18/76 (24%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 25/91 (27%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 6/34 (18%)
C2H2 Zn finger 309..329 CDD:275368 8/17 (47%)
C2H2 Zn finger 337..353 CDD:275368
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 18/77 (23%)
SUF4-like 224..>279 CDD:411020 17/55 (31%)
C2H2 Zn finger 224..244 CDD:411020 4/19 (21%)
C2H2 Zn finger 224..244 CDD:275368 4/19 (21%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

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