DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and M1BP

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:431 Identity:120/431 - (27%)
Similarity:190/431 - (44%) Gaps:88/431 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TCRVC--LAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAY 71
            |||||  .|.::|..:|      .|.|..:|:..:..::...|.:...:||.||:.|.:||..|.
  Fly    12 TCRVCAKYASNKRSPKL------FERSNTKMIDNIEALTGLRLENYGCLPDQICECCSMELASAV 70

  Fly    72 QFREKALRKQMEIEEYCRELGLLDE---------------SDVMMI------------------- 102
            :.||:.:..|.|:     .|||.:|               .|::..                   
  Fly    71 KLRERCIAAQREL-----LLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQEIVLE 130

  Fly   103 --KEE-DGSQQQCDEEMYILEETTTGEEE-------------HQEEKGHEEYLEVDTSDQQECIG 151
              ||| |.::.:.|...|.:.|...||::             ..|::..::.||:| .|.:..:|
  Fly   131 EPKEEIDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELD-EDTELIVG 194

  Fly   152 DTIEYLEDNYTIEMNSDQTEI---VLESEKQYEETPSQQLALQEAAKASLKARRGRVRRGLNSLT 213
            |    :.|.|..: :.|:..:   ||:.|.::|....::.:|....|......|   |||..   
  Fly   195 D----VNDAYVYD-SDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRSDDAR---RRGTG--- 248

  Fly   214 TSDGTEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKP 278
                   |.|||:.|||..:.|.....|.|||.|..|:.||||.::|....:|::||..|||.:|
  Fly   249 -------GVYICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERP 306

  Fly   279 YKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKD 343
            :.|.:|.|.|...:....||..|...:||||..|.|||...:.|..|.||||..:.|||:.|:|.
  Fly   307 FACKYCGRCFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKS 371

  Fly   344 FRLLHHMRQHEETKLHQNAVMLAESMKVEMVAEQGGGNEIR 384
            |.|..|:..|..:.:|:..:   |..:::.|.||....|::
  Fly   372 FMLPTHLSTHFRSGVHKRHL---EKAEMKQVLEQEQKRELK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 24/79 (30%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
COG5048 <250..369 CDD:227381 45/118 (38%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
zf-H2C2_2 266..288 CDD:290200 10/21 (48%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 294..318 CDD:290200 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 23/81 (28%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
COG5048 276..>331 CDD:227381 20/54 (37%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 293..317 CDD:290200 10/23 (43%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:290200 11/21 (52%)
C2H2 Zn finger 337..357 CDD:275368 8/19 (42%)
zf-H2C2_2 350..372 CDD:290200 11/21 (52%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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