DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and nom

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:8 Identity:4/8 - (50%)
Similarity:6/8 - (75%) Gaps:0/8 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ISILFIIV 20
            |:||..|:
  Fly    34 INILLTIL 41

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 4/8 (50%)
C2H2 Zn finger 225..245 CDD:275368
COG5048 <250..369 CDD:227381
C2H2 Zn finger 253..273 CDD:275368
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 309..329 CDD:275368
C2H2 Zn finger 337..353 CDD:275368
nomNP_649821.2 zf-AD 5..76 CDD:214871 4/8 (50%)
C2H2 Zn finger 184..204 CDD:275368
C2H2 Zn finger 212..261 CDD:275368
C2H2 Zn finger 269..289 CDD:275368
C2H2 Zn finger 297..313 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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