DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zif and ZNF888

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_016882287.1 Gene:ZNF888 / 388559 HGNCID:38695 Length:830 Species:Homo sapiens


Alignment Length:385 Identity:101/385 - (26%)
Similarity:155/385 - (40%) Gaps:79/385 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SNLNDREHIPDG----ICKSC-KVELNMAYQFR----------------EKALRKQMEIEEY--- 87
            |||.....:..|    .||.| ||....:|..|                :||.|....:.::   
Human   451 SNLARHHRVHTGEKPYQCKECDKVFSRKSYLERHRRIHTGEKPYKCKVCDKAFRHDSHLAQHIVI 515

  Fly    88 --------CRELG-LLDESDVMMIKE--EDGSQ-QQCDEEMYILEETT---------TGEEEHQ- 130
                    |.|.| ...|:..:::.:  ..|.: .:|:|...:..:.:         |||:.:: 
Human   516 HTREKPYKCNECGKTFGENSALLVHKTIHTGEKPYKCNECGKVFNQQSNLARHHRLHTGEKPYKC 580

  Fly   131 -------EEKGH-EEYLEVDTSDQ-QECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQ 186
                   ..|.| |.:..:.|.:: .:|     :..:..:..:.:..|..::...||.|:.....
Human   581 KECDKVFSRKSHLERHRRIHTGEKPYKC-----KVCDKAFRRDSHLAQHTVIHTGEKPYKCNECG 640

  Fly   187 QLALQEAAKASLKA-RRGRVRRGLNSLTTSDG------------TEKGGYICDVCGNFYEKRGRM 238
            :..:|.::....|. ..|..|...|....|..            |.:..|.|:.||..:..:.::
Human   641 KTFVQNSSLVMHKVIHTGEKRYKCNECGKSFNHKSSLAYHHRLHTGEKPYKCNECGKVFRTQSQL 705

  Fly   239 MEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRG 303
            ..|.|.|.|...|.||.||..|.::..|..|...|||.|||||..|.:.|..:|.|..|:.||.|
Human   706 ACHHRLHTGEKPYKCEECDKVFNIKSHLEIHRRVHTGEKPYKCRVCDKAFGRDSYLAQHQRVHTG 770

  Fly   304 IKPYVCKVCDKAF-AYAHSLTKHELIHSDIKLYRCDYCNKDFR----LLHHMRQHEETKL 358
            .|||.|||||||| .|:| |.:|..||:..|.::|..|.|.||    |:||...|...||
Human   771 EKPYKCKVCDKAFKCYSH-LAQHTRIHTGEKPFKCSECGKAFRAQSTLIHHQAIHGVGKL 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 14/60 (23%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 53/114 (46%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 294..318 CDD:290200 16/24 (67%)
C2H2 Zn finger 309..329 CDD:275368 12/20 (60%)
C2H2 Zn finger 337..353 CDD:275368 8/19 (42%)
ZNF888XP_016882287.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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