DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and ZNF568

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_940941.2 Gene:ZNF568 / 374900 HGNCID:25392 Length:644 Species:Homo sapiens


Alignment Length:396 Identity:99/396 - (25%)
Similarity:147/396 - (37%) Gaps:103/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTPQTCRVCLAQSERLQRLDEIREE---GEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVE 66
            :||..|..|  ..:...:.|.||.|   ..|.|.|                       ||.|   
Human   219 VTPFKCNQC--GQDFSHKFDLIRHERIHAGEKPYE-----------------------CKEC--- 255

  Fly    67 LNMAYQFREKALRKQM----EIEEYCRELG--LLDESDVMM-----IKEEDGSQQQC----DEEM 116
             ..|:..:|..:..|.    |....|.|.|  .:..|:::.     ..|:..:.:.|    .::.
Human   256 -GKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKS 319

  Fly   117 YILEETTTGEEEHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYE 181
            .::|.    |..|..||.:|         .:||        ..:::.:.|..:.|.:...||.| 
Human   320 NLIEH----ERIHTGEKPYE---------CKEC--------GKSFSQKQNLIEHEKIHTGEKPY- 362

  Fly   182 ETPSQQLALQEAAKASLKARRGRVRRGLNSLT-----------------------TSDGTEKGGY 223
                   |..|..:|.  :|...|...:.|.|                       ....|.:..|
Human   363 -------ACNECGRAF--SRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPY 418

  Fly   224 ICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQF 288
            :|..||..:.:...:..|.|.|.....|.|:.|...|..:|.|..|...|||.|||:||.|.:.|
Human   419 VCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAF 483

  Fly   289 FYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQH 353
            ...|.|..|:.:|.|.|||.|.||.|||:...:||:||.||:..|.|.|:.|.|.|....::.:|
Human   484 IQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEH 548

  Fly   354 EETKLH 359
            |  |:|
Human   549 E--KIH 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 16/84 (19%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 47/110 (43%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 294..318 CDD:290200 13/23 (57%)
C2H2 Zn finger 309..329 CDD:275368 10/19 (53%)
C2H2 Zn finger 337..353 CDD:275368 4/15 (27%)
ZNF568NP_940941.2 KRAB 48..102 CDD:214630
KRAB 48..87 CDD:279668
C2H2 Zn finger 224..244 CDD:275368 6/21 (29%)
zf-H2C2_2 236..261 CDD:290200 11/51 (22%)
COG5048 248..634 CDD:227381 90/365 (25%)
C2H2 Zn finger 252..272 CDD:275368 6/23 (26%)
zf-H2C2_2 264..289 CDD:290200 5/24 (21%)
C2H2 Zn finger 280..300 CDD:275368 4/19 (21%)
zf-H2C2_2 292..317 CDD:290200 2/24 (8%)
C2H2 Zn finger 308..328 CDD:275368 3/23 (13%)
zf-H2C2_2 320..345 CDD:290200 8/45 (18%)
C2H2 Zn finger 336..356 CDD:275368 4/27 (15%)
zf-H2C2_2 348..373 CDD:290200 8/34 (24%)
C2H2 Zn finger 364..384 CDD:275368 4/21 (19%)
zf-H2C2_2 380..401 CDD:290200 2/20 (10%)
C2H2 Zn finger 392..412 CDD:275368 0/19 (0%)
zf-H2C2_2 408..429 CDD:290200 5/20 (25%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
zf-H2C2_2 432..457 CDD:290200 7/24 (29%)
C2H2 Zn finger 448..468 CDD:275368 6/19 (32%)
zf-H2C2_2 460..485 CDD:290200 12/24 (50%)
C2H2 Zn finger 476..496 CDD:275368 7/19 (37%)
zf-H2C2_2 488..513 CDD:290200 13/24 (54%)
C2H2 Zn finger 504..524 CDD:275368 10/19 (53%)
zf-H2C2_2 516..541 CDD:290200 12/24 (50%)
C2H2 Zn finger 532..552 CDD:275368 7/21 (33%)
zf-H2C2_2 544..569 CDD:290200 4/11 (36%)
C2H2 Zn finger 560..580 CDD:275368
zf-H2C2_2 572..597 CDD:290200
C2H2 Zn finger 588..608 CDD:275368
zf-H2C2_2 601..625 CDD:290200
C2H2 Zn finger 616..636 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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