DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and crol

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:406 Identity:90/406 - (22%)
Similarity:151/406 - (37%) Gaps:87/406 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ELTPQTCRVC---LAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKV 65
            |..|..|:||   ...|:.|.|..:|...|   |....|....|..:|.:...|:     |....
  Fly   245 ERKPFMCQVCGQGFTTSQDLTRHGKIHIGG---PMFTCIVCFNVFANNTSLERHM-----KRHST 301

  Fly    66 ELNMAYQFREKALRKQMEIE--------------EYCRELGLLDESDVMMIKEEDG-SQQQCD-- 113
            :...|....:|...::..::              :||.:.....|..|..:::..| :..:||  
  Fly   302 DKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDIC 366

  Fly   114 ------EEMYILEET-TTGEEEHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSD--Q 169
                  :|.|:.... .||:..||.:...::|...             |:|.::.....|..  :
  Fly   367 KKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRK-------------EHLANHMRSHTNETPFR 418

  Fly   170 TEIVLESEKQYE-----------ETP------SQQLALQEAAKASLKARRGRVRRGLNSLTTSDG 217
            .||..:|..:.|           |||      |:....:|..              ||.:....|
  Fly   419 CEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHL--------------LNHVRQHTG 469

  Fly   218 TEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCS 282
              :..:.|..|...:.::..::.|.|:|.|...:.|..|...|..::.:..|:..|||..|:||:
  Fly   470 --ESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCT 532

  Fly   283 FCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDF--- 344
            :|::.|..:..|.:|...|.|..|:.|..|.|.|.....||.|..:|:....::|:||.|.|   
  Fly   533 YCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRK 597

  Fly   345 -RLLHHMRQHEETKLH 359
             .|.:|||||.....|
  Fly   598 EHLNNHMRQHSSDNPH 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 16/94 (17%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 37/114 (32%)
C2H2 Zn finger 253..273 CDD:275368 4/19 (21%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368 9/19 (47%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 5/24 (21%)
COG5048 300..723 CDD:227381 74/343 (22%)
C2H2 Zn finger 307..327 CDD:275368 1/19 (5%)
C2H2 Zn finger 335..355 CDD:275368 4/19 (21%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
C2H2 Zn finger 391..411 CDD:275368 3/32 (9%)
C2H2 Zn finger 419..439 CDD:275368 4/19 (21%)
C2H2 Zn finger 447..467 CDD:275368 4/33 (12%)
C2H2 Zn finger 475..495 CDD:275368 4/19 (21%)
C2H2 Zn finger 503..523 CDD:275368 4/19 (21%)
C2H2 Zn finger 531..551 CDD:275368 5/19 (26%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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