DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG15436

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:355 Identity:83/355 - (23%)
Similarity:129/355 - (36%) Gaps:106/355 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QTCRVCLAQSERLQRLDEIREEGEESPNEMLIQLLG--VSYSNLNDREHIPDGICKSCKVELNMA 70
            :.||||:..|.:|..:.:.|.....|..||:.|..|  |...:|     ..:.||..|..::..|
  Fly     3 EICRVCMDISGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDL-----FSEMICPQCYEDVKSA 62

  Fly    71 YQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTTGEEEHQEEKGH 135
            |                                   |.:|.|:|                   .|
  Fly    63 Y-----------------------------------GIRQTCEE-------------------SH 73

  Fly   136 EEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQQLALQEAAKASLKA 200
            :.|..|    :.|.|.|.:                 ..|..|:.:|.:..:...:..|:.|.   
  Fly    74 QFYCRV----RDEGIEDAL-----------------CALLEEEDWEISEDEDARIDSASAAD--- 114

  Fly   201 RRGRVRRGLNSLTTSDG---TEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQV 262
                          .||   ::|..:.|..|...|:::|..:.|.|.|.....:.|..|...|::
  Fly   115 --------------DDGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRL 165

  Fly   263 REQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHEL 327
            |..|:.||.:|..:|||:||.|::.|..:|.|:|||..|.|.:|:.|..|.|.|..:..|.:|..
  Fly   166 RVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIR 230

  Fly   328 IHSDIKLYRCDYCNKDF-RLLH---HMRQH 353
            .|...:.::|..|.|.| |..|   |.|.|
  Fly   231 THGSERPFKCSKCTKTFTRKFHLDNHFRSH 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 19/79 (24%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
COG5048 <250..369 CDD:227381 39/108 (36%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
zf-H2C2_2 266..288 CDD:290200 10/21 (48%)
C2H2 Zn finger 281..301 CDD:275368 9/19 (47%)
zf-H2C2_2 294..318 CDD:290200 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
C2H2 Zn finger 337..353 CDD:275368 8/19 (42%)
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 25/132 (19%)
C2H2 Zn finger 128..148 CDD:275368 6/19 (32%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
COG5048 <180..341 CDD:227381 31/81 (38%)
C2H2 Zn finger 184..204 CDD:275368 9/19 (47%)
zf-H2C2_2 197..219 CDD:290200 10/21 (48%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
zf-H2C2_2 224..249 CDD:290200 7/24 (29%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
zf-H2C2_2 252..276 CDD:290200 4/9 (44%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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