DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG11696

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster


Alignment Length:458 Identity:93/458 - (20%)
Similarity:157/458 - (34%) Gaps:147/458 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EGEESPNEMLIQLLGVSYSNLNDREHIPDGI-----CKSCKVELNMAYQ-FREKALRKQMEIEEY 87
            |.|..|:|              :.|..||.:     .:..|..|...:| .:.|..:::.:.:..
  Fly   153 EPESQPDE--------------EEEPEPDPVKPRPRGRPRKTALQQTHQIIKRKYEKRKQQNKAK 203

  Fly    88 CRELGL---------LDESDVMMIKEEDGSQQQCDEEMYILEETTTGEEEHQE--EKGHEEYLEV 141
            ..||.|         |..|......::||.:.:.|||....|.|...:|:.:.  ::|..:..::
  Fly   204 ITELSLRESRARQRELKRSSAGAEDDQDGDEDEEDEEDVGGELTPDADEQPKPRGKRGRPKTKKL 268

  Fly   142 DTSDQQECIGDTIEY----------------------------LED------NYTIEMN------ 166
            .|:|..:   ||.|.                            |||      ::.:|.:      
  Fly   269 VTADDND---DTSEVPVKRSSIKEMDDYIAANVKLDCAICAAPLEDFNDLKRHFRVEHDCTGYVK 330

  Fly   167 -------------------------------------SDQTEIVLESEKQYEETPSQQLALQEAA 194
                                                 :.|...:|....|.:|. ..|.|:.||.
  Fly   331 CCNNRYKKRTLYVDHLHCHKDPQYFSCQSCRKNFLNRNSQVMHMLRFHSQQQEL-VHQCAICEAR 394

  Fly   195 KAS-------LKARRGRVR------------------RGLNSLTTSDGTEKGGYICDVCGNFYEK 234
            .|.       ||..:|..|                  ..:..:..:|.|.   .|||:||..:..
  Fly   395 FAKKFLLTMHLKGHKGTERPEVCDTCSKTFRTKFELSAHVKRMHAADFTP---IICDICGTHFRS 456

  Fly   235 RGRMMEHRR--RHDG-ICQYACELCDAKFQVREQLRKHMYSH---TGSKPYKCSFCSRQFFYESV 293
            :...:.|::  ..|| :.:..|.||....:....||||:..|   .|...|:|..|:.:....:.
  Fly   457 KANFLIHKKALHPDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRCLLCNAEKSSRAA 521

  Fly   294 LKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKL 358
            |.||...|...|.:.|.:|||.|....:|.:|...|:.|.||:|.:|.:.|:...:|..|:: |:
  Fly   522 LSSHMRYHHSAKRHKCSLCDKEFKLPRALAEHMATHTGIDLYQCQFCTRTFKSHANMHNHKK-KM 585

  Fly   359 HQN 361
            |.|
  Fly   586 HPN 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 11/63 (17%)
C2H2 Zn finger 225..245 CDD:275368 5/21 (24%)
COG5048 <250..369 CDD:227381 36/115 (31%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
zf-H2C2_2 266..288 CDD:290200 9/24 (38%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
zf-H2C2_2 294..318 CDD:290200 10/23 (43%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368 4/15 (27%)
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368 0/16 (0%)
C2H2 Zn finger 357..378 CDD:275368 2/20 (10%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..438 CDD:275368 0/20 (0%)
C2H2 Zn finger 447..465 CDD:275368 5/17 (29%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..529 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..583 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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