DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and Zfp819

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001014039.1 Gene:Zfp819 / 308561 RGDID:1309564 Length:614 Species:Rattus norvegicus


Alignment Length:316 Identity:85/316 - (26%)
Similarity:116/316 - (36%) Gaps:64/316 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MIKEEDGSQQQCDEEMYILEETTTGEEEHQEEKGHEEYLEVD-----------------TSDQQE 148
            :|..:.||.::|..|. .|:.....:.|||.....:....||                 ::.::.
  Rat   185 LISTQKGSPRRCPCEK-TLQPNLQTDSEHQSSATKQPNGVVDSCRLCTQGLSSAVCTTHSTGERA 248

  Fly   149 CIG----------------------DTIEYLEDNYTIEMNS----DQTEIVLESEKQYEETPSQQ 187
            |.|                      :.:||.:|.......|    .||...|:.|..:......:
  Rat   249 CTGNQCANVLSPRSPLRQHGILSQDEPVEYTKDEKAFTAGSASCEQQTTNTLDLETHFICHICGK 313

  Fly   188 LALQEAAKASLKARRGRVRRG--------LNSLTTSDG---------TEKGGYICDVCGNFYEKR 235
            ..||   |:.|....|..|..        |.|||||..         |::..|.|..||..:...
  Rat   314 SFLQ---KSELSFHPGTSREETRYECPDCLKSLTTSPSSLQAHHEAHTKQKPYTCHDCGKSFSYA 375

  Fly   236 GRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENV 300
            ..:..|.|.|.|...|.|..|...|..:..|..|...|||.|||.||.|.:.|.|.|.|:.|...
  Rat   376 SHLKVHLRIHTGERPYVCSDCGKAFSQKSVLTTHQRIHTGEKPYACSHCGKLFVYASDLRKHSRF 440

  Fly   301 HRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEET 356
            |.|.|||.|:.|.|.|:....|..|..||:..|.|:|..|.|.||...|::.|..|
  Rat   441 HTGEKPYECRDCGKVFSNKSHLPVHRRIHTGEKPYKCRDCGKSFRRKSHLQVHGRT 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 43/107 (40%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 294..318 CDD:290200 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)
Zfp819NP_001014039.1 KRAB 27..81 CDD:214630
C2H2 Zn finger 336..357 CDD:275368 6/20 (30%)
COG5048 <346..538 CDD:227381 53/151 (35%)
C2H2 Zn finger 365..385 CDD:275368 5/19 (26%)
C2H2 Zn finger 393..413 CDD:275368 5/19 (26%)
C2H2 Zn finger 421..441 CDD:275368 8/19 (42%)
C2H2 Zn finger 449..469 CDD:275368 6/19 (32%)
C2H2 Zn finger 477..497 CDD:275368 8/20 (40%)
SFP1 <499..582 CDD:227516
C2H2 Zn finger 505..525 CDD:275368
C2H2 Zn finger 533..553 CDD:275368
C2H2 Zn finger 561..581 CDD:275368
zf-H2C2_2 573..598 CDD:404364
C2H2 Zn finger 589..609 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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