DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and Y17G7B.22

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_871969.1 Gene:Y17G7B.22 / 259467 WormBaseID:WBGene00012473 Length:167 Species:Caenorhabditis elegans


Alignment Length:176 Identity:44/176 - (25%)
Similarity:66/176 - (37%) Gaps:44/176 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 LNSLTTSDGTEKGGYICDV-----CGNFYEKRG------------------RMMEHRRRHDGICQ 250
            ::|..|.|..||  .|.::     .||:....|                  |.:......|....
 Worm     1 MSSKLTKDEIEK--KIAELQELLRTGNYETNNGPERLKTIDIEVGEVTEGVRKLNVEWNEDNELL 63

  Fly   251 YACELCDAKFQVREQLRKH-MYSHTGSK------PYKCSFCSRQFFYESVLKSH--ENVHRGIKP 306
            :||:.|.:.|.....|..| ..:|....      .|.|..|:.:|.||.:|..|  |::|.||.|
 Worm    64 FACQKCMSAFHAESDLSNHEQLTHFNRNIPRKKFKYYCDKCNERFIYEHLLYRHKEEHLHTGIIP 128

  Fly   307 YVCKVCDKAFAYAHSLTKHELIHSD-IKLY--RCDYCNKDFRLLHH 349
            .|..:.:..       .||::..|| .|.|  .||:|:|:|....|
 Worm   129 GVALIDELR-------KKHKMTKSDFFKKYPNSCDHCSKNFDCNQH 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071
C2H2 Zn finger 225..245 CDD:275368 4/42 (10%)
COG5048 <250..369 CDD:227381 33/112 (29%)
C2H2 Zn finger 253..273 CDD:275368 5/20 (25%)
zf-H2C2_2 266..288 CDD:290200 6/28 (21%)
C2H2 Zn finger 281..301 CDD:275368 8/21 (38%)
zf-H2C2_2 294..318 CDD:290200 8/25 (32%)
C2H2 Zn finger 309..329 CDD:275368 2/19 (11%)
C2H2 Zn finger 337..353 CDD:275368 6/13 (46%)
Y17G7B.22NP_871969.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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