DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zif and Zfp93

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001347156.1 Gene:Zfp93 / 22755 MGIID:107611 Length:663 Species:Mus musculus


Alignment Length:257 Identity:75/257 - (29%)
Similarity:111/257 - (43%) Gaps:48/257 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 GSQQQCDEEMYILEETTTGEEEHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTE 171
            |.:..|...::      |.:..|.|||.:|         ..||        ...:::..|.|..:
Mouse   393 GKRFSCSSNLH------THQRVHTEEKPYE---------CNEC--------GKRFSLSGNLDIHQ 434

  Fly   172 IVLESEKQYEETPSQQLALQEAAK----ASLKARRGRVRRGLNSLTTSDGTEKGGYICDVCGNFY 232
            .|...||.|:        .:|..|    ||......||..|          || .:.|.|||..:
Mouse   435 RVHTGEKPYK--------CEECGKGFSSASSFQSHQRVHTG----------EK-PFHCSVCGKNF 480

  Fly   233 EKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSH 297
            .:....::|:|.|.|...|.||:|..:|.....|..|...|||.|||||..|.:.|.:.|.|::|
Mouse   481 SRSSHFLDHQRIHTGEKPYRCEVCGKRFPWSLSLHSHQSVHTGKKPYKCGECGKGFSHASSLQAH 545

  Fly   298 ENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLH 359
            .:||.|.||:.|.||.|.|:...:|..|:.:|:..|.|:||.|.|.|.....::.|:  ::|
Mouse   546 HSVHTGEKPFKCNVCQKQFSKTSNLQAHQRVHTGEKPYKCDTCGKAFSQKSSLQVHQ--RIH 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
COG5048 <250..369 CDD:227381 42/110 (38%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 294..318 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368 5/15 (33%)
Zfp93NP_001347156.1 KRAB 25..66 CDD:307490
COG5048 275..>613 CDD:227381 75/257 (29%)
C2H2 Zn finger 305..325 CDD:275368
C2H2 Zn finger 333..353 CDD:275368
C2H2 Zn finger 361..381 CDD:275368
C2H2 Zn finger 389..409 CDD:275368 3/21 (14%)
C2H2 Zn finger 417..437 CDD:275368 4/27 (15%)
C2H2 Zn finger 445..465 CDD:275368 5/19 (26%)
C2H2 Zn finger 473..493 CDD:275368 6/19 (32%)
C2H2 Zn finger 501..521 CDD:275368 6/19 (32%)
C2H2 Zn finger 529..549 CDD:275368 6/19 (32%)
C2H2 Zn finger 557..577 CDD:275368 7/19 (37%)
C2H2 Zn finger 585..605 CDD:275368 6/21 (29%)
C2H2 Zn finger 613..633 CDD:275368
C2H2 Zn finger 641..661 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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