DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and ZNF480

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_653285.2 Gene:ZNF480 / 147657 HGNCID:23305 Length:535 Species:Homo sapiens


Alignment Length:429 Identity:95/429 - (22%)
Similarity:156/429 - (36%) Gaps:138/429 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GEESPNEMLIQLLGVSYS-NLNDREHIPDGICKSCKVELNMAYQFREKALRKQMEIEEYCRELGL 93
            |..:.::.:.:.||||:. :|::.|..||                 |:.:....::|.:...   
Human   116 GSNAEDKPIKKQLGVSFHLHLSELELFPD-----------------ERVINGCNQVENFINH--- 160

  Fly    94 LDESDVMMIKEEDGS-------QQQCDEEMYILEETTTGEEEHQEEK-----GHEEYLEVDTSDQ 146
              .|.|..::|...|       :...|:..::.:|    ::.|..||     .|.:...|.:|..
Human   161 --SSSVSCLQEMSSSVKTPIFNRNDFDDSSFLPQE----QKVHLREKPYECNEHSKVFRVSSSLT 219

  Fly   147 QECIGDTIE----------------YLEDN------------------YTIEMNSDQTEIVLESE 177
            :..:..|:|                :|.::                  ::...|..:.:.:...|
Human   220 KHQVIHTVEKPYKCNSCGKVFSRNSHLAEHCRIHTGEKPYKCNVCGKVFSYNSNFARHQRIHTRE 284

  Fly   178 KQY-----------------------EETP----------SQQLAL---------------QEAA 194
            |.|                       ||.|          |.:.:|               .|..
Human   285 KPYECNECGKVFSNNSYLARHQRIHAEEKPYKCNECGKGFSHKSSLANHWRIYTGEKPYKCDECG 349

  Fly   195 KA----SLKARRGRVRRGLNSLTTSDGTEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACEL 255
            ||    :|..|..::..|          || .|.|:.||..:.:...:.:|.|.|.|...|.|..
Human   350 KAFYRIALLVRHQKIHTG----------EK-PYKCNECGKVFIQNSHLAQHWRIHTGEKPYKCNE 403

  Fly   256 CDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAH 320
            |...|.....|.:|...|||.|||||:.|.:.|...|.|.:|..:|.|.|||.|..|.|||.:..
Human   404 CGKVFNQLSNLARHRRIHTGEKPYKCNECGKAFSEYSGLSAHLVIHTGEKPYKCSECGKAFRHKL 468

  Fly   321 SLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLH 359
            |||.|:.||:..:.|:|:.|.|.|..:.|:.:|.  |:|
Human   469 SLTNHQRIHTGERPYKCNECGKVFNRIAHLARHR--KIH 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 11/57 (19%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
COG5048 <250..369 CDD:227381 44/110 (40%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 294..318 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..353 CDD:275368 5/15 (33%)
ZNF480NP_653285.2 KRAB 27..87 CDD:214630
KRAB 27..66 CDD:279668
COG5048 <158..501 CDD:227381 81/362 (22%)
C2H2 Zn finger 205..225 CDD:275368 3/19 (16%)
zf-H2C2_2 217..242 CDD:290200 3/24 (13%)
C2H2 Zn finger 233..253 CDD:275368 1/19 (5%)
zf-H2C2_2 245..270 CDD:290200 1/24 (4%)
C2H2 Zn finger 261..281 CDD:275368 1/19 (5%)
zf-H2C2_2 273..298 CDD:290200 4/24 (17%)
C2H2 Zn finger 289..309 CDD:275368 0/19 (0%)
zf-H2C2_2 301..326 CDD:290200 3/24 (13%)
C2H2 Zn finger 317..336 CDD:275368 2/18 (11%)
C2H2 Zn finger 345..365 CDD:275368 5/19 (26%)
zf-H2C2_2 358..382 CDD:290200 8/34 (24%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
zf-H2C2_2 385..410 CDD:290200 8/24 (33%)
zf-C2H2 399..421 CDD:278523 6/21 (29%)
C2H2 Zn finger 401..421 CDD:275368 5/19 (26%)
zf-H2C2_2 413..437 CDD:290200 11/23 (48%)
C2H2 Zn finger 429..449 CDD:275368 6/19 (32%)
zf-H2C2_2 442..466 CDD:290200 12/23 (52%)
C2H2 Zn finger 457..477 CDD:275368 9/19 (47%)
zf-H2C2_2 469..494 CDD:290200 11/24 (46%)
COG5048 481..>529 CDD:227381 9/27 (33%)
C2H2 Zn finger 485..505 CDD:275368 7/21 (33%)
zf-H2C2_2 497..522 CDD:290200 4/11 (36%)
C2H2 Zn finger 513..533 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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