DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and Clamp

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_061517712.1 Gene:Clamp / 1279795 VectorBaseID:AGAMI1_013779 Length:611 Species:Anopheles gambiae


Alignment Length:397 Identity:91/397 - (22%)
Similarity:146/397 - (36%) Gaps:90/397 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NLNDREHIPDGICKSCKVELNMAYQFREKALRKQMEIEEYCRELGLL------------DESDVM 100
            |.:.|.|..||...|..:.:....|   ..::.|..|.|..:.||.:            .:..:.
Mosquito   144 NHHKRTHNQDGETTSDAITVVTQAQ---NLVQAQNLISETGQNLGQIQIVATEALDPAPQQQQLQ 205

  Fly   101 MIKEEDGSQQQCDEEMYILEETTTGEEEHQEEKGHEEYLEVDTSDQQE---------------CI 150
            ..:|:...|||..::....:.....:.:.|.::..::..:.....||:               ||
Mosquito   206 HAQEQQQQQQQQQQQQQQAQAQAQAQAQQQAQQQAQQQAQQQAQQQQQQQVTTHTTKADKSQKCI 270

  Fly   151 G-------------------DTIEYLEDNYTIEMNSDQTEIVLESEKQYE--ETP------SQQL 188
            .                   :|....:....:..::.|..:..:.:.::|  |.|      |...
Mosquito   271 SCNGPIHSNPKRKGPKLIRCETCISNDGAQPVSRSTTQIFVAPDGDIKFEIGEIPNASNSNSSMD 335

  Fly   189 ALQEAAKASLKARRGRV---------RRGLNSLTTSDGTEKGGYI-------------------- 224
            :|.......:||....|         :|.|.::|..:.....|.|                    
Mosquito   336 SLMPGQMHPIKAEHALVPQQNAHPVKKRNLATVTKCNKCNGSGVIIVGGQKKLIQSSMHQQPEKP 400

  Fly   225 --CDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQ 287
              |:.||..:.:...:..|::.|.|...|.|.:|...|.....|:.||..|||.|||||..|..|
Mosquito   401 FTCNTCGGRFSRYSSLWSHKKLHTGEKNYKCNVCGIAFAKAVYLKNHMRIHTGEKPYKCGTCGMQ 465

  Fly   288 FFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQ 352
            |.....||:||..|.|.|||||:||||.||...:|..|..||:..|.|:|:.|...|....|::.
Mosquito   466 FSQSPHLKNHERTHSGEKPYVCEVCDKGFARHATLWNHRRIHTGEKPYKCNRCQSAFSQAAHLKN 530

  Fly   353 HEETKLH 359
            ||  |:|
Mosquito   531 HE--KVH 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 9/38 (24%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 49/110 (45%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..353 CDD:275368 4/15 (27%)
ClampXP_061517712.1 None

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