DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zif and ERV3-1-ZNF117

DIOPT Version :9

Sequence 1:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001334979.1 Gene:ERV3-1-ZNF117 / 109504726 -ID:- Length:483 Species:Homo sapiens


Alignment Length:334 Identity:85/334 - (25%)
Similarity:142/334 - (42%) Gaps:50/334 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YSNLNDREHIPDGI-CKSCKVELNMAYQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQ 109
            |.||..|:.....: ||..|.:.:...|..:..|.|..:..:|......:..|:...::..:...
Human    44 YENLQLRKGCKSVVECKQHKGDYSGLNQCLKTTLSKIFQCNKYVEVFHKISNSNRHKMRHTENKH 108

  Fly   110 QQCDE--EMYILEETTTGEEEHQ--------EEKGH--------EEYLEVDTSDQ----QECIGD 152
            .:|.|  :.:.:....|..:..|        |..|.        .::..:.|.::    :|| |.
Human   109 FKCKECRKTFCMLSHLTQHKRIQTRVNFYKCEAYGRAFNWSSTLNKHKRIHTGEKPYKCKEC-GK 172

  Fly   153 TIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQQLALQEAAKASLKARRGRVRRGLNSLTTSDG 217
            .  :.:.::.|......||     ||.|:        .:|..||..::         ::|||.:.
Human   173 A--FNQTSHLIRHKRIHTE-----EKPYK--------CEECGKAFNQS---------STLTTHNI 213

  Fly   218 TEKG--GYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYK 280
            ...|  .|.|:.|...:.:..::.||:..|.|..:|.||.|...|....:|.:|.|.|||.|.||
Human   214 IHTGEIPYKCEKCVRAFNQASKLTEHKLIHTGEKRYECEECGKAFNRSSKLTEHKYIHTGEKLYK 278

  Fly   281 CSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFR 345
            |..|.:.|...|.|.:|:.:|.|.|||.|:.|.|||....:||.|:.||:..|.|:|:.|.|.|.
Human   279 CEECGKAFNQSSTLTTHKRIHSGEKPYKCEECGKAFKQFSNLTDHKKIHTGEKPYKCEECGKAFN 343

  Fly   346 LLHHMRQHE 354
            .|.::.:|:
Human   344 QLSNLTRHK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 10/41 (24%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 43/105 (41%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 294..318 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
C2H2 Zn finger 337..353 CDD:275368 5/15 (33%)
ERV3-1-ZNF117NP_001334979.1 C2H2 Zn finger 111..131 CDD:275368 3/19 (16%)
C2H2 Zn finger 139..159 CDD:275368 2/19 (11%)
COG5048 163..>475 CDD:227381 66/215 (31%)
C2H2 Zn finger 167..187 CDD:275368 4/22 (18%)
C2H2 Zn finger 195..215 CDD:275368 6/28 (21%)
C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 6/18 (33%)
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..407 CDD:275368
C2H2 Zn finger 419..439 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.