DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and znf605

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001090653.1 Gene:znf605 / 100036625 XenbaseID:XB-GENE-5942644 Length:2009 Species:Xenopus tropicalis


Alignment Length:425 Identity:86/425 - (20%)
Similarity:141/425 - (33%) Gaps:160/425 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTPQTCRVCLAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNM 69
            |.|..|.|| .:|.||.|               .:||..|.::...         |:||    ..
 Frog  1281 LKPHVCEVC-GKSFRLPR---------------YLQLHIVMHTGTP---------CESC----GC 1316

  Fly    70 AYQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTTGEEEHQEEKG 134
            .::|:.:|.|...:. ..||                                          .:|
 Frog  1317 LFRFKRRAGRHSKKC-RLCR------------------------------------------TRG 1338

  Fly   135 HEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIV--LESEKQYEETPSQQ---LALQEAA 194
            .|:.|:.||            .|..:..:..::.:.:::  |...|| .:.|:|.   .|.:|..
 Frog  1339 KEQGLQPDT------------ILAQSPLVVPDAPKAKVLSSLPHGKQ-SKAPNQAKRGKAFKEKK 1390

  Fly   195 KASLKARRGRVRRGLNSLT-TSDGTEKGGYICDVCGNFYEKRGR---------MMEHRRR----- 244
            ...||...|:.|:...||| ..:|.:|...:.|:..:..:||||         |:...:.     
 Frog  1391 SQLLKGPSGQSRKRKLSLTQPEEGKKKPKRVEDLSPSTPKKRGRPPGKPSTDKMLSRLKTSAIKS 1455

  Fly   245 ------------HDG--------------------------------------ICQYACELCDAK 259
                        |.|                                      |..:.|..|...
 Frog  1456 ESKSIAVSGEGLHPGETAKSSVSGEGKPIKSDEVPTYQILPTMSIKEEPNASEISSFLCSECGQN 1520

  Fly   260 FQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTK 324
            |..:..|..|:.:|||.:|:.|..|.::|...:.|..|:.||.|::|:||.||:.:|....||..
 Frog  1521 FPYKHLLDSHLQTHTGDRPFACPDCDKRFAKINHLTIHKRVHTGVRPHVCSVCNSSFRQKSSLLA 1585

  Fly   325 HELIHSD-----IKLYRCDYCNKDFRLLHHMRQHE 354
            |...|::     :.||.|..|.|:|:....:..||
 Frog  1586 HRYTHANQPPLLVTLYECSICLKEFKQSSDLEAHE 1620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 16/77 (21%)
C2H2 Zn finger 225..245 CDD:275368 6/45 (13%)
COG5048 <250..369 CDD:227381 35/110 (32%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368 4/15 (27%)
znf605NP_001090653.1 C2H2 Zn finger 42..62 CDD:275368
C2H2 Zn finger 70..90 CDD:275368
PHA03247 <95..490 CDD:223021
C2H2 Zn finger 1114..1134 CDD:275368
COG5048 1282..1704 CDD:227381 85/424 (20%)
C2H2 Zn finger 1286..1306 CDD:275368 10/35 (29%)
C2H2 Zn finger 1311..1329 CDD:275368 6/21 (29%)
C2H2 Zn finger 1514..1534 CDD:275368 5/19 (26%)
C2H2 Zn finger 1542..1562 CDD:275368 5/19 (26%)
C2H2 Zn finger 1570..1590 CDD:275368 7/19 (37%)
C2H2 Zn finger 1603..1623 CDD:275368 6/18 (33%)
C2H2 Zn finger 1631..1651 CDD:275368
C2H2 Zn finger 1659..1679 CDD:275368
C2H2 Zn finger 1687..1707 CDD:275368
C2H2 Zn finger 1716..1734 CDD:275368
PTZ00121 <1740..2001 CDD:173412
Blue background indicates that the domain is not in the aligned region.

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