DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myh4 and zip

DIOPT Version :9

Sequence 1:NP_001001244.1 Gene:myh4 / 407946 XenbaseID:XB-GENE-989283 Length:1935 Species:Xenopus tropicalis
Sequence 2:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster


Alignment Length:1957 Identity:759/1957 - (38%)
Similarity:1185/1957 - (60%) Gaps:80/1957 - (4%)


- Green bases have known domain annotations that are detailed below.


 Frog    34 KNTVFVDDVKELYVKGMVTAREDGKITVK-TDDGRTVTVKENQIYPQNPPKFDKIEDMAMMTHLN 97
            |..|:|....:.:|...:......::.|: .:.|:.|.:..:.|...|||||||:||||.:|.||
  Fly    79 KRLVWVPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQKMNPPKFDKVEDMAELTCLN 143

 Frog    98 EASVLYNLKERYAAWMIYTYSGLFCATVNPYKWLPVYNPEVVAGYRGKKRMEAPPHIFSLSDNAY 162
            |||||:|:|:||.:.:|||||||||..|||||.||:|..:::..|:|.||.|.|||:|:::|:||
  Fly   144 EASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVPPHVFAITDSAY 208

 Frog   163 QAMLTDRENQSVLITGESGAGKTVNTKRVIQYFATIAALGDKKKES------------------- 208
            :.||.|||:||:|.|||||||||.|||:|||:.|.:||  .|.|.|                   
  Fly   209 RNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAA--SKPKGSGAVPHPAVLINFSVNTNKY 271

 Frog   209 --------------------------SNSLQGNLEDQIIQANPLLEAFGNAKTVRNDNSSRFGKF 247
                                      ||..:|.||.|::||||:||||||||||:||||||||||
  Fly   272 IKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKF 336

 Frog   248 IRIHFGTTGKLSSADIETYLLEKSRVTFQLSAERSYHIFYQILTNKKPEIVEMLLLTTNPYDYPS 312
            |||:|..:|.:|.|:||||||||||...|...||::|||||:|....||..|..:| .:...|..
  Fly   337 IRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFIL-DDVKSYAF 400

 Frog   313 ISQGELVVKSINDEEELMATDSAIDVLGFNQEEKMGIYKMTGAVMHHGNLKFKQKQREEQAE-PD 376
            :|.|.|.|..::|..|..||..:::::|...|:...|:::..||:..|::||:|::..:||. ||
  Fly   401 LSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQATLPD 465

 Frog   377 STEVADKIAYLLGLNSADLLKGLCYPRVKVGNEFVTKGQTVPQVYNSVGALCKSVFEKLFLWMVT 441
            :| ||.|||:||||:..|:.:....||:|||.:||||.||..||..:|.|:.|:.:|::|.|:|.
  Fly   466 NT-VAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKACYERMFKWLVN 529

 Frog   442 RINQQLD-TKQPRQFFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEG 505
            |||:.|| ||:....|||:||:||||||:.||.||||||:|||||||.|||.||:||||||::||
  Fly   530 RINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 594

 Frog   506 IDWEFIDFGMDLAACIELIEKPLGIFSILEEECMFPKATDTSFKNKLYEQHLGKCKNFEKPKPGK 570
            |:|:|||||:||...|:||:||.||.::|:|||.||||||.:|.:||...|      ...||..|
  Fly   595 IEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTFVDKLVSAH------SMHPKFMK 653

 Frog   571 G--KAEAHFSLVHYAGTVDYNISGWLEKNKDPLNESVVQLYQKSSVKLLSLLY--------SSYA 625
            .  :..|.|::|||||.|||:.:.||.||.|||||::|.|.|.|....:..::        :..|
  Fly   654 TDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQA 718

 Frog   626 ATDGDAGGKGGKKKKGSSFQTVSGLFRENLNKLMTNLRSTHPHFVRCLIPNETKTPGIMDNHLLI 690
            .||...   |.:.:|| .|:|||.|::|.|.|||..||:|:|:||||:|||..|..|.:|..|::
  Fly   719 LTDTQF---GARTRKG-MFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAPLVL 779

 Frog   691 HQLRCNGVLEGIRICRKGFPSRILYGDFKQRYKVLNASAIPEGQFIDSKKACEKLLGSIDVDHTQ 755
            .|||||||||||||||:|||:||.:.:|:|||::|..:.||:| |:|.||||||::.::::|...
  Fly   780 DQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKG-FMDGKKACEKMIQALELDSNL 843

 Frog   756 YKFGHTKVFFKAGLLGTLEEMRDEKLAQLITRTQALCRGYLMRLEFTKMMERREAIYVIQYNLRS 820
            |:.|.:|:||:||:|..|||.||.|::.||...||.|||:|.|..:.|.:::..||.:||.|..:
  Fly   844 YRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCAA 908

 Frog   821 FMNVKHWPWMKLYFKIKPLLKSAETEKEMANMKEEFEKTKEALVKAEARKKELEEKMVAMLQEKN 885
            ::.:::|.|.:||.|:||||:..:.|:::...::|.::.:|.|.......:|.|.|....|.||.
  Fly   909 YLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTLAKNTQEYERKYQQALVEKT 973

 Frog   886 DLVLQVQSESETLADSEERCEGLIKVKIQLESKIKELTERLEDEEESNAELTAKKRKLEDECSEL 950
            .|..|:|:|.|..|::||....|:..|.:||..::||..|:|:|||....|..:|:|||....:|
  Fly   974 TLAEQLQAEIELCAEAEESRSRLMARKQELEDMMQELETRIEEEEERVLALGGEKKKLELNIQDL 1038

 Frog   951 KKDIDDLELTLAKVEKEKHATENKVKNLTEEMAVLDENISKLSKEKKALQEAHQQTLDDLQAEED 1015
            ::.:::.|....|::.||...:.|:|...|::|:.|:...||.||||.|:|........|..||:
  Fly  1039 EEQLEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLKEKKLLEERANDLSQTLAEEEE 1103

 Frog  1016 KVSSLSKAKTKLEQQVDDLEGSLEQEKKLRLDLERAKRKLEGDLKLTQETVMDLENDKQQTEEKL 1080
            |...|:|.|.|.|..:.:||..|.::::.|.:.:|:|||:|.::...:|.:.:......:.:.:|
  Fly  1104 KAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERRVQVDEMQAQL 1168

 Frog  1081 KKKDFEISQLQGKIEDEQSLGTQLQKKIKELQARIEEVEEEIEAERAARAKVEKQRADLSRELEE 1145
            .|::.|::|...:|::|.:.....||..:||::::.|::|::|||:|||||.||.|.|||.|||.
  Fly  1169 AKREEELTQTLLRIDEESATKATAQKAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEA 1233

 Frog  1146 ISERLEEAGGATSAQIEMNKKREAEFQKLRRDLEEATLQHEATAGALRKKHADSVAELGEQIDNL 1210
            :...|.::...|:||.|:..|||.|...|::.|||.|:.||.....:|.||:..:..:.:|::||
  Fly  1234 LKNELLDSLDTTAAQQELRSKREQELATLKKSLEEETVNHEGVLADMRHKHSQELNSINDQLENL 1298

 Frog  1211 QRVKQKLEKEKSELKMEIDDLASNLENVSKSKANLEKVNRVIEDQLSEVKAKDDEHQRLLNDLST 1275
            ::.|..|||.|..|:.|..|||:.|.:|:.|:...::..:..|.|::|::.|..|.:|..::|..
  Fly  1299 RKAKTVLEKAKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIERARSELQE 1363

 Frog  1276 QKARLQTETGELSRQLEERESLISQLSRGKQGFTQQVEELKRQLEEETKAKNALAHALQSARHDC 1340
            :..:||.|...::.||||.|...|...:.......|:.|.::.|||||:.|..|:..|:....:.
  Fly  1364 KCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETRQKLGLSSKLRQIESEK 1428

 Frog  1341 DLLREQFEEEQEAKAELQRSLSKANGEVSQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEQVE 1405
            :.|:||.||:.|||...:|.|::...::.:.:.|.|.|| ...:||||.||:|.:.::..|.||:
  Fly  1429 EALQEQLEEDDEAKRNYERKLAEVTTQMQEIKKKAEEDA-DLAKELEEGKKRLNKDIEALERQVK 1492

 Frog  1406 AVNSKCASLEKTKQRLQSEVEDLMVDVERANSAAAALDKKQRNFDKVLVEWKQKYEEGQAELEAA 1470
            .:.::...|:|:|:::|||:||..:::|...:....|:|||:||||:|.|.|...|:...|.:.|
  Fly  1493 ELIAQNDRLDKSKKKIQSELEDATIELEAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTA 1557

 Frog  1471 LKESRSLSTEIFKMKNAYEEALEHVETLKRENKNLQQEISDLTEQIGESGKSVVELEKAKKQVEQ 1535
            .:|:|...|::..:....:||.:.:|.|:.:.|.||.|:.||....|.:.|:|.||||||:.:|.
  Fly  1558 EREAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALES 1622

 Frog  1536 EKNDLQAALEEAEGSLEHEEAKILRIQLELNQVKSEVDRKIAEKDEEIEQLKRNSQRSIDTMQST 1600
            :..:|:|..||.|..|:..|...||:::.:..::|:.:|.:..|:|..|:.:|...:.:..:::.
  Fly  1623 QLAELKAQNEELEDDLQLTEDAKLRLEVNMQALRSQFERDLLAKEEGAEEKRRGLVKQLRDLETE 1687

 Frog  1601 LDSEIRSRNDALRLKKKMEGDLNELEIQLGHANRQASEAQKQLRNVQGQFKETQLQLDEAIRAQE 1665
            ||.|.:.|..|:..|||:||||.|:|..:...|:...:|.|..:.:|.|.|:.....:||..|:|
  Fly  1688 LDEERKQRTAAVASKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVKDALRDAEEAKAAKE 1752

 Frog  1666 DLKEQVAVTERRNNLFQAEIEENRAGLEQTERSRKIAEQELLDASERLQLLHSQNTSLINSKKKL 1730
            :|:......||:....:||:.:....|..:||:|:.||.|..:.:|.:....::.:.:|:.|::|
  Fly  1753 ELQALSKEAERKVKALEAEVLQLTEDLASSERARRAAETERDELAEEIANNANKGSLMIDEKRRL 1817

 Frog  1731 ESDICQLQNEAEEAVQEARNAE---EKAKKAITDAALMAEELKKEQDTSAHLERMKKNLEQTVKD 1792
            |:.|..|:.|.||   |..|:|   ::::||......:..||..|:..|...|..:..||:..|:
  Fly  1818 EARIATLEEELEE---EQSNSEVLLDRSRKAQLQIEQLTTELANEKSNSQKNENGRALLERQNKE 1879

 Frog  1793 LQHRLDEAEQLAMKGGKKQLQKLESRVRELENELDNEQKHGVEAVKGVRKYERRVKELTYQTEED 1857
            |:.:|.|.|.......|..:..||:::..||.:|:||.|..:...|..||.::::||||...|::
  Fly  1880 LKAKLAEIETAQRTKVKATIATLEAKIANLEEQLENEGKERLLQQKANRKMDKKIKELTMNIEDE 1944

 Frog  1858 KKNILRLQDLVDKLQSKVKAYKRQAEEAEEQANTHLGRFRKVQHELEEAEERADIAESQVNKLRT 1922
            ::::.:.::.:|||.|::|..||..:|.||:......:.||.|.|.|:..|..:....::|.|:|
  Fly  1945 RRHVDQHKEQMDKLNSRIKLLKRNLDETEEELQKEKTQKRKYQRECEDMIESQEAMNREINSLKT 2009

 Frog  1923 KSRDIGG 1929
            |.|..||
  Fly  2010 KLRRTGG 2016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myh4NP_001001244.1 Myosin_N 34..72 CDD:397036 7/38 (18%)
MYSc_class_II 99..766 CDD:276951 353/723 (49%)
Myosin_tail_1 846..1923 CDD:396244 344/1079 (32%)
zipNP_523860.2 Myosin_N 80..117 CDD:280832 6/36 (17%)
Myosin_head 133..854 CDD:278492 361/735 (49%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 353/723 (49%)
Myosin_tail_1 931..2011 CDD:279860 345/1083 (32%)
Prefoldin 1431..1515 CDD:298833 31/84 (37%)
FAM76 <1847..1926 CDD:292665 21/78 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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