Protein Alignment CG9727 and Rfx4

DIOPT Version :9

• Sequence 1: NP_001262317.1
• Gene: CG9727 / 40794
• FlyBaseID: FBgn0037445
• Length: 1329
• Species: Drosophila melanogaster
• Sequence 2: XP_006514176.1
• Gene: Rfx4 / 71137
• MGIID: 1918387
• Length: 745
• Species: Mus musculus
• Alignment Length: 681
• Identity: 131/681 - (19%)
• Similarity: 222/681 - (32%)
• Gaps: 226/681 - (33%)

  Fly   310 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLGTRGNS 374
            |:.|:..:.|....|.||:..:|..|:.:||:...:|::.|.|||:::|.||.:..|||||||.|
Mouse    71 TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQS 135

  Fly   375 RYCY--------------------------AAMRKTTKLT------------------------P 389
            :|.|                          ...|:.||.|                        |
Mouse   136 KYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKREVTKQTVAYSPRSKLGTLLPDFPNVKDLNLP 200

  Fly   390 PQLPQ------------LCKTEQIVAGDSNSDPSQLTSASSLGGLP----STGGDSECWDVV--- 435
            ..||:            .|:........:|.|..|........|:|    ...|.|...::|
Mouse   201 ASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVC 265

  Fly   436 -----RSWAEKLLNTKLESVADLSSRIKSNNATVSTKKYTPREPKEKRV-LADIG--------PL 486
                 ::.:..|:.|.|:::.|        :.|...:|:..:..:..:| |.|:.        .|
Mouse   266 DSILYKAISGVLMPTVLQALPD--------SLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 322

  Fly   487 KKRRKKKRKGSTSSESSCN------------------------QLVTGQDAGSSQEASDEQ---I 524
            .:|..:..:..||....|.                        ..:|.|...:.:::.||.   |
Mouse   323 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSRDEHRRLI 387

  Fly   525 LKIKQEIIDSPIHPQQPPIGYLQQVTPM------NLATDQRSSSAVRNLTPKILEMGS---PAVV 580
            :::.|| .|..:..|.|...|::.:..|      .:|..::.|  ::.:..:.|.|.|   ..|:
Mouse   388 IQLYQE-FDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGS--LKKVAQQFLLMWSCFGTRVI 449

  Fly   581 --LTQQEVSPTG------IVIKDEVEDYTSNIFCK----KVLKAQQTKGFWANSPSSGTTSGVGL 633
              :|.......|      ::..|.|.....::.|:    ::::|.:.:|..|.:...
Mouse   450 RDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEAQEE-------- 506

  Fly   634 LVPPTITTTSATPPPPNSETSPVPGPGLSMGPPSQMMSTSSVSPSSTVDTTPK-----VASRNQM 693
                 |..|.||||.|:      |||..|   |::..::..|.|.|:..:.|.     :::...|
Mouse   507 -----IILTEATPPTPS------PGPSFS---PAKSATSVEVPPPSSPVSNPSPEYTGLSTAGAM 557

  Fly   694 MILRAKRLMAAENAALAAAEDS-GLP--ENLGLPRERVISICNMDKHELDDYFLPGEDEENSEEP 755
            .............||.:.||:| .||  .:..:|...|       .|.:..|      ....|..
Mouse   558 QSYTWSLTYTVTTAAGSPAENSQQLPCMRSTHMPSSSV-------THRIPVY------SHREEHG 609

  Fly   756 DNELLQYFQMGDAEEKQLNSLDAAEQNKNP--------------------------------QEP 788
            ......|...|:.....|       ||:.|                                .||
Mouse   610 YTGSYNYGSYGNQHPHPL-------QNQYPALPHDTAISGPLHYSPYHRSSAQYPFNSPTSRMEP 667

  Fly   789 PTMGSAPEAMPAP--GRGAAVVAAAAAMLAP 817
            ..|.|.|...|.|  .|...|..|.|...:|
Mouse   668 CLMSSTPRLHPTPVTPRWPEVPTANACYTSP 698

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9727	NP_001262317.1	RFX_DNA_binding	307..383	CDD:280427	28/98 (29%)
Rfx4	XP_006514176.1	RFX_DNA_binding	69..144	CDD:367002	28/72 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3712
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D346630at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910