DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9727 and RFX2

DIOPT Version :10

Sequence 1:NP_001262317.1 Gene:CG9727 / 40794 FlyBaseID:FBgn0037445 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_000626.2 Gene:RFX2 / 5990 HGNCID:9983 Length:723 Species:Homo sapiens


Alignment Length:219 Identity:62/219 - (28%)
Similarity:102/219 - (46%) Gaps:46/219 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 IGQGEFG------------EVDLCQLENRKVAVKKLHGISQADEFSFHREIRVLGSLKHPNVVE- 584
            ||:|.|.            ||..|:|::||        :::::...|..|..:|..|:|||:|. 
Human   227 IGRGSFKTVYKGLDTETTVEVAWCELQDRK--------LTKSERQRFKEEAEMLKGLQHPNIVRF 283

  Fly   585 -------VVGVCTIQKPILCIMEYMENGDLKSYILKNPTIQTSQCISICTQLAAGLAYLESCN-- 640
                   |.|    :|.|:.:.|.|.:|.||:|:.:...::.....|.|.|:..||.:|.:..  
Human   284 YDSWESTVKG----KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 344

  Fly   641 FVHRDIAARNCLVDG-EGNVKIADFGMARSLYSQEYYKVEG--KFVLPIRWMAWEALLLGKFSTA 702
            .:|||:...|..:.| .|:|||.|.|:|....:.....|.|  :|:.|       .:...|:..:
Human   345 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAP-------EMYEEKYDES 402

  Fly   703 SDVWGFGVTMWEIFSLCSEKPYSD 726
            .||:.||:.|.|:.:  ||.|||:
Human   403 VDVYAFGMCMLEMAT--SEYPYSE 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9727NP_001262317.1 PHA03247 <40..207 CDD:223021
RFX_DNA_binding 307..385 CDD:460512
RFX2NP_000626.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
RFX1_trans_act 4..154 CDD:461362
RFX_DNA_binding 200..274 CDD:460512 13/54 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..332 12/43 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..723
Blue background indicates that the domain is not in the aligned region.

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