Sequence 1: | NP_001262317.1 | Gene: | CG9727 / 40794 | FlyBaseID: | FBgn0037445 | Length: | 1329 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001073517.1 | Gene: | rfx3 / 570989 | ZFINID: | ZDB-GENE-061103-253 | Length: | 765 | Species: | Danio rerio |
Alignment Length: | 988 | Identity: | 175/988 - (17%) |
---|---|---|---|
Similarity: | 290/988 - (29%) | Gaps: | 433/988 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 QLGAQWTKSAAPAATTAP---------VSNSIPIPQPIPVALP-----------LQKPNANPYGN 51
Fly 52 CSLQPADIVYSATRFQGPAIHAKGSPLTITPVGPVGGAPASAQISPTSHTHVPVPVATPSGFVPP 116
Fly 117 PFSNATSASGGVSTSVLTPNPFATASANAAGLAFANAFSFSTAQQLGLGKIMHAMGGATAGVPSA 181
Fly 182 PVPVTTTPATAAPSTPTIAGPRHPNEGVPAASGVINSTIAENVMNALSNSNSAGSVPSEEKMRRV 246
Fly 247 LQVIETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLPGECADTDPLRQPQNPLGTRSE-INHT 310
Fly 311 INWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLGTRGNSR 375
Fly 376 YCYAAMR----------------KTTKLTPPQLPQLCKTEQI---VAGDSNSDPSQLT-SASSLG 420
Fly 421 GLPSTGGDSECWDVVRSWAE------------------KLLNT----KLESVADLSSRIKSN--- 460
Fly 461 NATVSTKKYTPREPKEKRVLADIGPLKKRRKKKRKGSTSSESSCNQLVTGQDAGSSQEASDEQIL 525
Fly 526 KIKQEIIDSPIHPQQPPIGYLQQVTPMNLATDQRSSSAVRNLTPKILEMGSPAVVLTQQEVSPTG 590
Fly 591 IVIKDEVEDYTSNIFCKKVLKAQQTKGFWANSPSSGTTSGVGLLVPPTITTTSATPPPPNSE--- 652
Fly 653 ------------------TSPVPGPGLSMGPPSQMMS---------------------------- 671
Fly 672 -------------------------TSSVSPSSTVDTTPKVA-------SRNQMMILRAKRLMAA 704
Fly 705 ----------------------ENAALAAAEDSGLPENLGLPRE----RVISICNMDKHELDDYF 743
Fly 744 LPGEDE-ENSEEP-------DNELLQYFQMGDAEE-----------KQLNSLDAAEQNKNPQEPP 789
Fly 790 TMGSAPEAMPAPG 802 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9727 | NP_001262317.1 | RFX_DNA_binding | 307..383 | CDD:280427 | 30/91 (33%) |
rfx3 | NP_001073517.1 | RFX1_trans_act | <2..141 | CDD:282451 | 35/174 (20%) |
RFX_DNA_binding | 190..262 | CDD:280427 | 28/71 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3712 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D346630at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |