Protein Alignment CG9727 and rfx7a

DIOPT Version :10

• Sequence 1: NP_001262317.1
• Gene: CG9727 / 40794
• FlyBaseID: FBgn0037445
• Length: 1329
• Species: Drosophila melanogaster
• Sequence 2: XP_688865.5
• Gene: rfx7a / 560368
• ZFINID: ZDB-GENE-100309-3
• Length: 1508
• Species: Danio rerio
• Alignment Length: 1199
• Identity: 257/1199 - (21%)
• Similarity: 425/1199 - (35%)
• Gaps: 353/1199 - (29%)

  Fly   234 AGSVPS-----EEKMRRVLQV-IETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLPGECADTD 292
            ||.:||     :......||: |:.|:....:.::..||:.|..|..||||:|||:||...:..:
Zfish    12 AGPLPSAVQGLQGPEASALQLKIKNSICKTVQSKVDCILQDVEKLTDIEKLYLYLKLPSGPSSGN 76

  Fly   293 PLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMK 357
            ...:..:...:|::..|..:|:|:|||...:.|:|||:||::|.:||:.|....||.|||||:||
Zfish    77 EKNEQSSMTSSRTQQMHAFSWIRNHLEEHPETSLPKQEVYDEYKSYCDSLGYHALSAADFGKIMK 141

  Fly   358 QVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQLCKTEQIVAGDS---NSDPSQLTSASSL 419
            .|||.::.||||.||.|:|||:.:||.|.:..|.||.|   :...:||.   .....||:||...
Zfish   142 NVFPNMKARRLGMRGKSKYCYSGLRKKTFVQMPSLPNL---DLHKSGDGCEVFESTGQLSSAEDE 203

  Fly   420 GGLPSTGGDSECWDVVRSWAEKLLNTKLESVADLSSRIKSNNATVSTKKY--------TPREPKE 476
            ..:.:.|       :|..||:|:|:.:.:||.|| :|...|:..:.||..        :|...|.
Zfish   204 VRMAACG-------LVCEWAQKVLSRQFDSVEDL-ARFLLNSHYIGTKSVAALTVMTGSPSGAKM 260

  Fly   477 KRVLADIGPLKKRRKKKRKGSTSSESSCNQLVTGQDAGSSQEASDEQILKIKQEIIDSPIHPQQP 541
            ....:...|           :|.|.|...|:.|  ....|.:|..:...||:::..:..:|...|
Zfish   261 SIQSSAFAP-----------TTDSHSFQPQVKT--LVSPSIDAKQQLQRKIQKKQQEQKLHSPLP 312

  Fly   542 PIGYLQQVTPMNLATDQRSSSAVRNLTPKI---LEMGSPAVVLTQQEVSPTGIVIKDEVEDYTSN 603
                          .:.::..|...:||..   :..||||::..|    |.|||:.......|
Zfish   313 --------------VEAQARRADGGITPVAGTGIPCGSPALLSPQ----PIGIVVAAVSSPIT-- 357

  Fly   604 IFCKKVLKAQQTKGFWANSPSSGTTSGVGLLVPPT---ITTTSATP------PPPNSETSPV--- 656
                 |.:::|..     |||....:.....|.|.   :.|.|..|      .|.|...|||
Zfish   358 -----VQRSRQLM-----SPSPVPMASADSKVLPVNFQVVTQSVQPVKQSPKAPHNISASPVSDR 412

  Fly   657 ----------PGP----GLSMGPPSQMMSTSSVSPSSTVDTTPKVASRNQMMILRAKRLMAAENA 707
                      |.|    |:::..|:.:.:.   ||..||.:||.|:|.|   :::...:....|.
Zfish   413 SARHRYAQILPKPSASSGITLRSPTLLFTN---SPIKTVMSTPHVSSVN---VVKMTTISLGSNG 471

  Fly   708 ALAAAEDSGLPENLGLPRERVISICNMDKHELDDYFLPGEDEENSEEPDNELLQYFQMGDAEEKQ 772
            :..:.....|..|...|....:|                   ..|::|
Zfish   472 SGTSTPADALTSNKARPASAGVS-------------------SLSDDP----------------- 500

  Fly   773 LNSLDAAEQNKNPQEPPT------MGSAPEAMPAPGRGAAVVAAAAAMLAPVPAP---------S 822
                          :|.|      :.:.|.|:...||...:...:...:......         |
Zfish   501 --------------QPVTRVRSGSIAAMPSALARLGRSTTITPISDTKINTEAITGSGQEQGGIS 551

  Fly   823 MLPAQAGVGSASASLALMSKKHQQQNQHQNLQLQRSKQLPLISN----NKRKI----SLSNASSN 879
            .|.|.|.||.:....::|.|.     :..::.....|..|.:..    |.|.:    :::..|:|
Zfish   552 RLAAAADVGGSGVPRSVMFKP-----RAASVPSPHDKASPGLGTGTKCNGRTLLRVNTMAAGSNN 611

  Fly   880 GSNKNCIFLPISPNTNGSVTTPTATGSSNPSQNCFAS------PGL------TRMK--------- 923
            .||.|...|...|.:..|||....|   :|.....||      |||      |.:|
Zfish   612 MSNTNANTLYQIPGSAQSVTDKVMT---SPKDAVLASKSPHKRPGLCTDLSPTPVKKAHISILPD 673

  Fly   924 -----QRPNLLSKQQSLDC------------------------------------DNRDPMIGAH 947
                 |:.:::.||....|                                    ...:.:.|..
Zfish   674 TGSTGQKSDIMVKQIPRSCTPVRPESAPLTAMAKVTAGPVRNSGFQTVHRPQRISQTNEMLCGLE 738

  Fly   948 RKGRGYVYSYP-TSTSASAPPSPSILPQWMCRNWSLGGGNISSFADSSH---------------- 995
            ....|..|..| |||.:......:.:.|.:||..|:..|.....:.:..
Zfish   739 GASSGLDYRVPVTSTLSQDTSMENTIFQSVCRPRSISQGRWEGSSTTVEGRAVVTRTVSAPGQAL 803

  Fly   996 -------SADPLVNQNSMDLETSLALTG---ENELDTSEMQR-----SQSVPLSQ---------- 1035
                   |.|.|::|.  |......:.|   |:||.....|.     :|.||..:
Zfish   804 LQQAAKISQDLLIDQT--DPSGVCEMKGVFWESELQDGTQQHQDVYGAQMVPEPKKMPTPVMDPL 866

  Fly  1036 ---LQRRGSQQSPSLNFYSENSN----------SQQSAPLKETGLLYEEVEVDSLLSANFTR--- 1084
               .|...|.|...::.|...:|          ..|.:.::|...:.|::::::.:. ||:.
Zfish   867 PAITQASPSNQEAQMSDYGTQTNIGYFTFNDDDMTQDSIVEELVQMEEQMKINNSIQ-NFSNCVD 930

  Fly  1085 -KFNSITQQTATTCSSSAGSSS-GYSSGGSAGIVSRSVPSTPLPHQQQNSLTSLNGGGGAASSGG 1147
             ......|...||..|:..::: .|||..|.|...::...||.|..:.            ..||.
Zfish   931 ISMQGQQQSMQTTMMSTLQTNTLYYSSAHSRGTPIQTPTPTPTPTSEM------------MGSGQ 983

  Fly  1148 GVMGIGNGGNCG-------VGNGFFTISDSFNWEGSTSNNSQLGYAHSYSARNSLDISKSMPTTP 1205
            |:|   :...|.       |.:..           .:|..:.:|..||       ..|.|:|.:|
Zfish   984 GLM---HESPCSRLVPTTPVDSAL-----------GSSRQTPIGTPHS-------SCSSSVPPSP 1027

  Fly  1206 IATQR-FRYSPAEVHRDFLINGNTIDSLP 1233
            :..:. |.::|.........:|:|:.|.|
Zfish  1028 VECRNPFAFTPINSSITGYHDGSTVSSSP 1056

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9727	NP_001262317.1	PHA03247	<40..207	CDD:223021
		RFX_DNA_binding	307..385	CDD:460512	40/77 (52%)
rfx7a	XP_688865.5	None