Protein Alignment CG9727 and Rfx2

DIOPT Version :9

• Sequence 1: NP_001262317.1
• Gene: CG9727 / 40794
• FlyBaseID: FBgn0037445
• Length: 1329
• Species: Drosophila melanogaster
• Sequence 2: XP_038939066.1
• Gene: Rfx2 / 301121
• RGDID: 1588579
• Length: 784
• Species: Rattus norvegicus
• Alignment Length: 415
• Identity: 97/415 - (23%)
• Similarity: 154/415 - (37%)
• Gaps: 128/415 - (30%)

  Fly    35 IPVALPLQKPNANPYGNCSLQPADIVYSATRFQGPAIHAKGSP---LTITPVGPVGGAPASAQIS 96
            :|.....|:|  .|.......||::  .....|......||:|   ||:..|.||
  Rat    72 LPTRSDTQRP--TPREPLPELPAEL--QRVLVQAAGSTPKGTPMQTLTLPRVQPV---------- 122

  Fly    97 PTSHTHV-PVPVATPSGFVPPPFSNATSASGGVSTS-VLTPNPFATASANAAGLAFANAFSFSTA 159
            |....|| |..|....|      .:|..|:|.:..: ...|:|...|.::||..       |.|.
  Rat   123 PPQVQHVYPAQVQYVEG------GDAVYANGAIRAAYTYNPDPQLYAPSSAASY-------FETP 174

  Fly   160 QQLGLGKIMHAMGGATAGVPSAPVPVTTTPATAAPSTPT--IAGPRHPNEGVPAASGVINSTIAE 222
                        |||.          .|..|::.|:.|:  :.|......|.|..||. .:.:..
  Rat   175 ------------GGAQ----------VTVAASSPPAVPSHGMVGITMDVSGTPIVSGA-GTYLIH 216

  Fly   223 NVMNALSNS--NSAGSVPSEEKMRRVLQVIETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLP 285
            ..|::..:|  ::|.|.|:..:|     .|||             |::..||.|.:...|
  Rat   217 GGMDSTRHSLAHTARSSPATLEM-----AIET-------------LQKSEGLAPHKGGLL----- 258

  Fly   286 GECADTDPLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTA 350
                                  |..:.|:..:.|....||:|:..:||.|:.:|:...::|::.|
  Rat   259 ----------------------NSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLEPVNAA 301

  Fly   351 DFGKVMKQVFPGVRPRRLGTRGNSRY--------------------CYAAMRKTTKLTPPQLPQL 395
            .|||:::.||.|:|.|||||||||:|                    .|.|||:......|:....
  Rat   302 SFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPTHQKPRYRPA 366

  Fly   396 CKTEQIVAGDSNSD----PSQLTSA 416
            .|::.:..|.::|:    |.|..:|
  Rat   367 QKSDSLGDGSAHSNMHSTPEQAMAA 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9727	NP_001262317.1	RFX_DNA_binding	307..383	CDD:280427	32/95 (34%)
Rfx2	XP_038939066.1	RFX1_trans_act	73..215	CDD:398335	43/191 (23%)
		RFX_DNA_binding	262..334	CDD:396712	28/71 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3712
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D346630at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910