Sequence 1: | NP_001262317.1 | Gene: | CG9727 / 40794 | FlyBaseID: | FBgn0037445 | Length: | 1329 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011246631.1 | Gene: | Rfx1 / 19724 | MGIID: | 105982 | Length: | 1073 | Species: | Mus musculus |
Alignment Length: | 586 | Identity: | 117/586 - (19%) |
---|---|---|---|
Similarity: | 200/586 - (34%) | Gaps: | 218/586 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 SAAPAATTA-----PVSNSIPIPQPIPVALPLQKPNANPYGNCS---LQPADIVYSATRFQGPAI 71
Fly 72 HA-----KGSPLTITPVGPVGGAPA---------------------------------------- 91
Fly 92 ----------SAQISPTSHT---------------------HVPVP--VATPSGFVPPPFSNATS 123
Fly 124 ASGGVSTSVLTPNPFATASA-----NAAGLAFANAFSFSTAQQLGLGKIMHAMGGATAGVPSAPV 183
Fly 184 PVTTTPATAAPSTPTIAGPRHPNEGVPAASGVINSTIAE--NVMNALSNSNSAGSVPSEEKMRRV 246
Fly 247 LQVIETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLPGECADTDPLRQPQNPLGTRSE-INH- 309
Fly 310 ------TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRL 368
Fly 369 GTRGNSRYCYAAMRKTTKLTPPQLPQLCKTEQIVA--GDSNSDPSQLTSASSLGGL--------P 423
Fly 424 STGGDSECWDVVRSWAEKLLNTKLESVADLSSRIKSNNATVSTKKYTPREPK---EKRVLAD-IG 484
Fly 485 P 485 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9727 | NP_001262317.1 | RFX_DNA_binding | 307..383 | CDD:280427 | 30/82 (37%) |
Rfx1 | XP_011246631.1 | RFX1_trans_act | 209..467 | CDD:398335 | 50/266 (19%) |
RFX_DNA_binding | 531..606 | CDD:396712 | 30/76 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3712 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D346630at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |