DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9727 and rfx5

DIOPT Version :9

Sequence 1:NP_001262317.1 Gene:CG9727 / 40794 FlyBaseID:FBgn0037445 Length:1329 Species:Drosophila melanogaster
Sequence 2:XP_005159531.1 Gene:rfx5 / 101884332 ZFINID:ZDB-GENE-070717-3 Length:590 Species:Danio rerio


Alignment Length:635 Identity:162/635 - (25%)
Similarity:266/635 - (41%) Gaps:112/635 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 IAENVMNALSNSNSAGSVPSEEKMRRVLQVIETSLDDNAKLQISQILERVSGLKPIEKLFLYLRL 284
            :||:.:.|   .:|||.  .|.:...:||.:::::..|.:.::.:|||.|......:||:|||:|
Zfish     1 MAEDQLKA---DSSAGE--GETEPNTLLQKLKSNISKNVQGKVDKILEDVQRFSDNDKLYLYLQL 60

  Fly   285 P-----GECADTDPLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSI 344
            |     ||.:.      ..|.:.|..:: ||.||:|||||......:||||||..|..:|:.|..
Zfish    61 PSGPSAGEKSG------DSNSVNTADQL-HTCNWIRSHLEEHPDTCLPKQDVYETYRKHCDNLQH 118

  Fly   345 KPLSTADFGKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQLCKTEQIVAGDSNSD 409
            :|||.|:|||:::.:||.::.||||.||.|:|||:.:|:.|.|..|.||.|         |..:|
Zfish   119 RPLSAANFGKIIRDIFPNIKARRLGGRGQSKYCYSGIRRKTVLNMPLLPNL---------DLKND 174

  Fly   410 PSQLTSASSLGGLPSTGGDSECWDVVRSWAEKLLNTKLESVADLSSRIKSNNATVSTKKYTPREP 474
            ||:||..........|  ::.| :::..||:|:|....::|.:::..:...:  :...:.:..|.
Zfish   175 PSELTELVQTYKQEVT--EAAC-ELICDWAQKILKRSFDTVVEIARFLVQEH--IVNPRCSQAEL 234

  Fly   475 KEKRVLADIGPLKKRRKKKRKGSTSSESSCNQLVTGQDAGSSQEASDEQILKIKQEIIDSPIHPQ 539
            .....||. ||.|..:..|:..:.|.            ||.::|  |...::.||:..|.   .:
Zfish   235 VTSAALAG-GPSKPHKVIKKIPAASR------------AGGAEE--DGGSVENKQKEKDG---VE 281

  Fly   540 QPPIGYLQQVT--PMNLATDQRSSSAVRNLTPKILEMGSPAVVLTQQEVSPTGIVIKDEVEDYTS 602
            ||| ...|||:  |.|.....|..:.::.| |::|..|:     ..::.||..:...|......:
Zfish   282 QPP-SNKQQVSEKPPNKVESARVEAYMKKL-PQLLPRGT-----VPEKTSPPCLAPADSGSVQVT 339

  Fly   603 NIFCKKVLKAQQTKGFWANSPSSGTT------SGVGLLVPPTITT-----TSATPPPPNSETSP- 655
            .......:.:|          ..||.      |||.|..|....|     |||.|.|......| 
Zfish   340 LPITVTTIPSQ----------PGGTVPVMILPSGVSLSYPEREKTSVTVATSAAPTPVVQRARPA 394

  Fly   656 ----VPGPGLSM-----------GPPSQMMSTSSVSPSSTVDTTPKVASRNQMMILRAKRLMAAE 705
                .|.|..|:           |.|.:......:|...    :|.:.:.|..::.|.....|..
Zfish   395 APKRAPDPSTSVSASGVVLKRKRGRPRKQRPEDLLSHLQ----SPSIPTPNPALLTRGVIQKAMP 455

  Fly   706 NAALAAAEDSGLPENLGLPRERVISICNMDKHELDDYFLPGEDEENSEEPDNELLQYFQMGDAEE 770
            :...||      |..|       :.|...|:..|....||...|.:..|..:.::|.....:||:
Zfish   456 SCPPAA------PSQL-------VEIVIQDQQSLMLSQLPTIQEVSDVEHRSVVVQCHPAPEAEK 507

  Fly   771 KQLNSLDAAEQNKNPQEPPTMGSAPEAMPAPGRGAAVVAAAAAMLAPVPA 820
            :|...|.......|.::...|......:.:.||.|.:....:|:....||
Zfish   508 QQSVLLMQGPNQLNYEQGRRMVIQRAPLSSEGRPAPIEVPQSAITYLPPA 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9727NP_001262317.1 RFX_DNA_binding 307..383 CDD:280427 37/75 (49%)
rfx5XP_005159531.1 RFX_DNA_binding 81..157 CDD:280427 37/76 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596870
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5454
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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