DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9727 and LOC100538179

DIOPT Version :9

Sequence 1:NP_001262317.1 Gene:CG9727 / 40794 FlyBaseID:FBgn0037445 Length:1329 Species:Drosophila melanogaster
Sequence 2:XP_003201650.2 Gene:LOC100538179 / 100538179 -ID:- Length:1551 Species:Danio rerio


Alignment Length:1425 Identity:301/1425 - (21%)
Similarity:489/1425 - (34%) Gaps:446/1425 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 SVPSEEKMRRVLQVIETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLP-GECADTD------- 292
            |:.|.|........|:.|:..:.:.::..||:.|.....||||:|||:|| |.....|       
Zfish    15 SLQSPEATALQYNKIKNSICKSVQSKVESILQDVEKFTDIEKLYLYLKLPSGPSGGNDKRTENQR 79

  Fly   293 ----PLRQPQNPL-GTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADF 352
                |....||.: .:|::..:..||:|:|||...:.|:|||:||::|.:||:.|...|||.|||
Zfish    80 GSASPALCDQNSMSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADF 144

  Fly   353 GKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQL--------CKTEQIVAGDSNSD 409
            ||:||.|||.::.||||.||.|:|||:.:||...:..|.||.|        |:..: .||.|.|.
Zfish   145 GKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLHKSGDGCELLE-SAGQSPSA 208

  Fly   410 PSQLTSASSLGGLPSTGGDSECWDVVRSWAEKLLNTKLESVADLSSRIKSNNATVSTKKY----- 469
            ..::.||:             | .:|..||:|:|:.:.:||.:| :|...|:..:.||..     
Zfish   209 EDEMRSAA-------------C-GLVCEWAQKVLSRQFDSVEEL-ARFLLNSHYIGTKSMAALTV 258

  Fly   470 ---TPREPKEKRVLADIGPL-----------------------------KKRRKKKRKGSTSSES 502
               ||...|.....:...|.                             ||::::|.......::
Zfish   259 MTGTPTGMKTPTPASAFVPTAEANSFQPQVKTLPSPSVDAKQQLQRKIQKKQQEQKLTSPLPMDA 323

  Fly   503 SCNQLVTGQDA-GSSQEASDEQILKIKQEIIDSPIHPQQPPIGYLQQVTPMNLATDQRSSSAVRN 566
            ...:...|... |||..:|...:|        ||    ||.||.:....|..: |.||:...:.:
Zfish   324 QARRAEAGTPVPGSSLTSSSPALL--------SP----QPTIGIVVAAVPSPI-TVQRNRQLMTS 375

  Fly   567 LTP------KILEMGSPAVV--LTQQEVSPTGIVIKDEVEDYTSNIFCKKVLKAQQTKGFWANSP 623
            .:|      |::.:....|.  :.|...:|..|. ...|.|..:.....::|            |
Zfish   376 PSPVGAAEGKVVPVNFQVVTQPVKQSPKTPQNIP-ASPVGDRLARHRYAQIL------------P 427

  Fly   624 SSGTTSGVGLLVPPTITTTSA-----TPPPPNSETSPVPGPGLSMGPPSQMMSTSSVSPSST-VD 682
            ....||.:.|..|||:..|::     .|....|..:.|....:|:.|.|. .:|:.:.|:|| :.
Zfish   428 KPSATSAIALRSPPTLLITNSPIKTVMPTSHVSSVNVVKMTAISLAPNSS-STTTPLRPASTGIS 491

  Fly   683 TTPKVASRNQMM---------ILRAKRL--------------------------MAAENAALAAA 712
            :|..:...||..         :.:|.||                          .||:..:.|:.
Zfish   492 STASLEESNQAQNGASVMSSGLGKAGRLSSNPTISAPTATSEVKVTFEAVNDSATAADKQSTASG 556

  Fly   713 EDSGL-----------------------PENLGLPRERVISICNMDKHELDDYFLPGEDEENSEE 754
            ..:||                       ||.:    .|..|........:.....|..:..|:::
Zfish   557 ASTGLKNERATKFRASSEPSLLIKASPVPERV----TRAKSDSTAPSSTIMGALAPSSNNNNNDQ 617

  Fly   755 PDNELLQYF----QMGDAEEKQL-------NSLDAAEQNKNP---------------------QE 787
            .::.|  |.    |..|||...:       .|.||...:|:|                     |:
Zfish   618 QESTL--YLTVTSQNVDAELSSICAVATASTSKDAVLGSKSPRKRSASVLETHTIPVKRVFISQQ 680

  Fly   788 P--------PTMGSAPEAMPAPGRGAAVVAAAAAMLAPVPAP--------SMLPAQ--------A 828
            |        |.:..|.:.:..||..|          .|..||        |.||.|        .
Zfish   681 PLDVSSNAKPGLVIAAKRIQRPGTPA----------RPESAPCKVTLKHSSSLPTQILALSDTPI 735

  Fly   829 GVGSASASLALMSKKH----------------------QQQNQHQNLQLQRSKQLPLISNNKRKI 871
            ||...|.::...|...                      ||...||.:....|:::..:|..|..:
Zfish   736 GVLDTSQTVNAQSTTQMENDVADISSDEMASGNSTVLLQQIPSHQQISSAVSQEVSAVSELKSSL 800

  Fly   872 SLSNASSNGSNKNCIFLPISPNTNGSVTTPTAT---------GS-----------SNPSQNCFAS 916
            ...:......:|.....|:...|..|.|:...|         ||           .:.:|:....
Zfish   801 QDYSQQIQAEHKQIAANPLPMMTQASETSSQLTLQQDIVDFAGSQASIDYFPFNDDDMTQDSIVE 865

  Fly   917 PGLTRMKQRPNLLSKQQS-LDCDNRDPMIGAHRKGRGYVYS--------YPTSTSASAP------ 966
            . |.:|:::..|.|..|| |:|.:.. :.|....|:|.:.|        |.:|.|::.|      
Zfish   866 E-LVQMEEQMKLNSSLQSYLNCVDIS-IQGQATVGQGAILSPHQTNTQFYHSSHSSTTPVHTPTP 928

  Fly   967 -PSPSILPQWMCRNWSLGGGN----------------ISSFADSSHS--ADPLVNQNS------M 1006
             |:|:..|.....:..|.||:                :.|.....|:  :.||.|.:|      :
Zfish   929 TPTPTPTPTPTPTSEILPGGHSLTRESPCSRMATVTPVDSILGGRHTPISTPLSNCSSSVPPSPI 993

  Fly  1007 DLETSLALTGENELDTSEMQRS--QSVPLSQLQR--RGSQQSPSLNFYSENSNSQQSAPLKET-- 1065
            :.....|.|..|...|.....|  .|.|:..:||  ........|.:.:...||...:|:..|  
Zfish   994 ECRNPFAFTPINSSITGYHDGSVVSSSPVKPMQRPMATHPDKAKLEWINNRYNSTAGSPVISTNS 1058

  Fly  1066 --GLL--YEEVEVDSLLSANFTRKFNSITQQTATTCSSSAGSSSGYSSGGSAGIVSRSVPSTPLP 1126
              |:|  |:::..|..      ||.::......|..|.|....         |.:.|....:|:.
Zfish  1059 TIGILPSYQDLVEDHF------RKPHAFAIPGQTLQSQSRHQD---------GNLGRLATVSPVQ 1108

  Fly  1127 HQQQNSLTSL------------NGGGGAASSGGGVM---------------------------GI 1152
            ..||.:|:|.            .|.|...:||||..                           .:
Zfish  1109 QGQQTTLSSKQESFAVPAPLDNKGAGSTTASGGGTFRCRSVSPAVRQRNLSGTTAQTVTTAPRSV 1173

  Fly  1153 GNGGNCGVGNGFFTISDSFNWEGSTSNNSQLGYAHSYSARNS---LDISKSMPTTPIATQRFRYS 1214
            .:..||.:.:....|         .||:..:..|.|.:.|:.   |:|.......|::.|..:.:
Zfish  1174 VSPFNCPLTSEVLNI---------LSNSQSVVSASSLAQRSQSVPLNIMMQSELLPVSHQAQQSN 1229

  Fly  1215 PAEV----------HRDFLINGNTIDSLPSS---------------AFAGGVVPTDPTLALSTDT 1254
            .|::          ..|..:.|..:::||::               .|..|....:..|.|    
Zfish  1230 SAKITTVLLSKMDTDGDDAVRGLGVNNLPANYTARMNLTQILETTQGFPVGPNSQNQQLPL---- 1290

  Fly  1255 LIDDSAPSSADVVEAMIGVTGILDDFXNLHEEKAQGEIEISEQQEPDAVEENEVQSAAKE 1314
               ||:||..|..:     ||.|  .....|:.|....|...|..| .::..|.|...:|
Zfish  1291 ---DSSPSPFDFQK-----TGYL--MSTGEEQVAYSSGETQAQSGP-GLQPTEEQLELQE 1339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9727NP_001262317.1 RFX_DNA_binding 307..383 CDD:280427 39/75 (52%)
LOC100538179XP_003201650.2 RFX_DNA_binding 99..175 CDD:280427 39/75 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596869
Domainoid 1 1.000 103 1.000 Domainoid score I6746
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25954
orthoMCL 1 0.900 - - OOG6_109460
Panther 1 1.100 - - O PTHR12619
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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