Protein Alignment CG9727 and rfx1a

DIOPT Version :9

• Sequence 1: NP_001262317.1
• Gene: CG9727 / 40794
• FlyBaseID: FBgn0037445
• Length: 1329
• Species: Drosophila melanogaster
• Sequence 2: XP_021324672.1
• Gene: rfx1a / 100038773
• ZFINID: ZDB-GENE-070424-94
• Length: 914
• Species: Danio rerio
• Alignment Length: 738
• Identity: 151/738 - (20%)
• Similarity: 232/738 - (31%)
• Gaps: 268/738 - (36%)

  Fly    11 QWTKSAAPAATTAPV-SNSIPIPQPIPVALPL-QKPNANPYGNCSLQPADIVYSATRFQGPAIHA 73
            |:.:......||:.: |:|.|..:     .|| .:.:|..|           |.||...|....:
Zfish   201 QYVEGGEANYTTSTIRSSSFPYTE-----TPLYTQSSAGQY-----------YEATPASGSEAAS 249

  Fly    74 KGSPLTITPVGPVGGAPASAQISPTSHTHVPVPVATPSGFVPPPFSNATSASGGVSTSVLTPNPF 138
            .|:|||   |....|:|.           ||:.||.....|..|   .|:|..||
Zfish   250 PGTPLT---VSVTSGSPG-----------VPMFVAGTGQIVANP---TTAAGSGV---------- 287

  Fly   139 ATASANAAGLAFANAFSFSTAQQLGLGKIMHAMGG-ATAGVPSAPVPVTTTPATAAPSTPTIAGP 202
             ||...|||.| ||....|..:..|.|......|| ..||             |.:.|:....|.
Zfish   288 -TAVVAAAGTA-ANGSGESAGEANGSGGSYVIQGGYMLAG-------------TGSGSSGNGHGY 337

  Fly   203 RHPNEGVPAASGVINSTIAENVMNALSNSNSAGSVPSEEKMRRVLQVIETSLDDNAKLQISQILE 267
            .||....||...:              |.....||||.:|                ||.
Zfish   338 PHPTRASPATVSI--------------NEGEDNSVPSADK----------------KLS------ 366

  Fly   268 RVSGLKPIEKLFLYLRLPGECADTDPLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVY 332
              ||                         ||            :.|:..:.|....||:|:..:|
Zfish   367 --SG-------------------------PQ------------VQWLLDNYETAEGVSLPRSTLY 392

  Fly   333 NDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLGTRGNSRYCY------------------- 378
            ..|:.:|:...::|::.|.|||:::.||.|:|.|||||||||:|.|
Zfish   393 CHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSSLLRLMEDQQ 457

  Fly   379 -AAMRKTTKLTPPQLPQLCKTEQIVAGDSNSDPSQLTSASSLGGLPSTGGDSECWDVVRSWAEKL 442
             .|||:.......:|..:.|.|.|..|.|:....|.....|.|
Zfish   458 HLAMRQQPFSQKQRLKPVQKVEGITNGMSSGSGQQQQQQQSSG---------------------- 500

  Fly   443 LNTKLESVADLSSRIKSNNATVSTKKYTPREPKEKRVLADIGPLKKRRKKKRKGSTSSESSCNQL 507
                   ::|:|::::.....:...|..|..|.     .|:     :.|...:|.........||
Zfish   501 -------LSDISTQVQQYQQFLDASKALPEFPD-----VDL-----QGKALPEGIELEHLKSFQL 548

  Fly   508 VTGQDAGSSQEASDEQILKIKQEIIDSPIHPQQPPIGYLQQVTPMNLATDQRSSSAVRNLTPKIL 572
            :..:..               :.|:|..::.|.|.:..|.: |....:.:|...||.
Zfish   549 LYREHC---------------EAILDVMVNLQFPLVETLWK-TFWRFSENQAGDSAT-------- 589

  Fly   573 EMGSPAVVLTQQEVSPTGIVIKDEVEDYTSN----IFCK--KVLKAQQTKGFWANSPSSGTTSG- 630
                              :.:.||.|.....    |.||  .||:       |:....:....|
Zfish   590 ------------------LAVHDESEKRLPKTCLVILCKYEPVLR-------WSRDCDNTLYQGL 629

  Fly   631 VGLLVPPTITTTSATPPPPNSETSPVPGPGLSM---------GPPSQMMSTSSVSPSSTVDTTPK 686
            |.:|:|..:.      |.|::.|..:.....|:         ..|.:|:.....|.|:...|..:
Zfish   630 VEMLIPDVLR------PIPSALTQAIRNFAKSLESWLTNAMVNIPEEMVRVKVTSASAFAQTLRR 688

  Fly   687 VASRNQMMILRAKRLMAAENAAL 709
            ..|.|.  :.:|.|.:....|.:
Zfish   689 YTSLNH--LAQAARAVLQNTAQI 709

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9727	NP_001262317.1	RFX_DNA_binding	307..383	CDD:280427	30/95 (32%)
rfx1a	XP_021324672.1	RFX1_trans_act	128..284	CDD:309643	28/115 (24%)
		RFX_DNA_binding	371..443	CDD:308073	28/71 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D346630at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.010